Puma concolor (puma): 112866154
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Entry
112866154 CDS
T08890
Symbol
MMP13
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo04657
IL-17 signaling pathway
pcoo04926
Relaxin signaling pathway
pcoo04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
112866154 (MMP13)
09152 Endocrine system
04926 Relaxin signaling pathway
112866154 (MMP13)
04928 Parathyroid hormone synthesis, secretion and action
112866154 (MMP13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcoo01002
]
112866154 (MMP13)
Peptidases and inhibitors [BR:
pcoo01002
]
Metallo peptidases
Family M10
112866154 (MMP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
112866154
NCBI-ProteinID:
XP_025784982
UniProt:
A0A6P6I9X4
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All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MHRAFLAALLLWSWARCRSLPLPSDGDDDLSEEDFQLAERYLKSYYYPMNPAGILKKAAT
SSVADRLREMQAFFGLEVTGKLDDNTLDIMKKPRCGVPDVGEYNVFPRTLKWSKTNLTYR
IVNYTPDLTHSEVEKAFKKALKVWSDVTPLNFTRLHDGTADIMISFGTKEHGDFYPFDGP
SGLLAHAFPPGPNYGGDAHFDDDETWTSTSKGYNLFLVAAHEFGHSLGLDHSKDPGALMF
PIYTYTGQSHFMLPDDDVQGIQSLYGPGDEDPNPKHPKTPDKCDPSLTLDAITSLRGETM
IFKDRFFWRLHPQQVDAELFLTKSFWPELPNRIDAAYEHASRDLIFIFRGRKFWALNGYD
ILEGYPKKISELGFPKDVKKISAAVHFEDTGKTLFFSGNQVWSYDDSNHAMDQDSPRLIE
EDFPGIGDKVDAVYEKNGYIYFFNGPIQFEYSIWSSRIVRVLPANSLLWC
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgggccttcctcgccgccctcctcctctggagctgggctcgctgtcggtccctg
ccccttcccagcgatggtgacgacgacctgtccgaggaagacttccagttggcagagcgc
tacctgaaatcctactactacccgatgaatcccgctggaatcctgaagaaagcggccacg
agctccgtggccgacaggctccgagaaatgcaagccttttttggcttagaggtcaccggc
aagctcgatgacaacaccttagacatcatgaagaaaccgagatgtggggtccccgatgtg
ggcgagtacaacgttttcccccgaacgctcaagtggtccaagacgaacttaacctacagg
attgtgaattatacccctgatctgactcattctgaagtcgaaaaggcattcaaaaaagcc
ctcaaagtttggtctgatgtgacaccactgaacttcaccagactccatgacggcactgct
gacatcatgatctcctttggaactaaagagcatggcgacttctacccatttgatggaccc
tctggtctgctggctcatgcttttcctcctgggccaaattatggaggcgacgcccatttt
gatgatgacgaaacatggacaagtacttccaaaggttacaacttgtttcttgtcgctgcc
cacgagtttggccactccttaggtctcgaccactccaaggacccaggagcactcatgttt
cccatctacacctacactggccaaagccacttcatgcttcctgatgacgatgtacaaggg
atccagtctctctatggcccgggagatgaggaccccaacccgaaacatcccaaaacgccg
gacaaatgtgacccgtccctgaccctcgacgccatcaccagtctccgaggagagaccatg
atctttaaagacagattcttctggcgcctgcacccccagcaggtggacgcagagctgttt
ttaacaaaatccttttggccggaacttcccaaccgcatcgacgccgcctacgagcacgcc
tcccgtgaccttatcttcatctttagaggcagaaaattttgggctcttaatggttatgac
attctggaaggttaccccaaaaaaatatccgaactgggatttccaaaagatgttaaaaag
ataagtgctgctgtccactttgaggacacagggaagacgctcttcttctcgggaaaccag
gtctggagctatgatgacagcaaccacgccatggatcaggactcccccaggctgatcgaa
gaggactttccagggattggtgataaagtggacgccgtctacgagaaaaacggttacatc
tattttttcaacgggcccatccagtttgaatacagcatctggagtagccgtattgttcgc
gtcctgccagcaaattccctgttgtggtgttaa
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