Puma concolor (puma): 112871779
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Entry
112871779 CDS
T08890
Symbol
TARDBP
Name
(RefSeq) TAR DNA-binding protein 43 isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
pcoo
Puma concolor (puma)
Pathway
pcoo03015
mRNA surveillance pathway
pcoo05014
Amyotrophic lateral sclerosis
pcoo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112871779 (TARDBP)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
112871779 (TARDBP)
05022 Pathways of neurodegeneration - multiple diseases
112871779 (TARDBP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcoo03019
]
112871779 (TARDBP)
Messenger RNA biogenesis [BR:
pcoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
112871779 (TARDBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TDP43_N
RRM_1
RRM_7
RRM_3
RL
TDP-43_C
RRM_5
Motif
Other DBs
NCBI-GeneID:
112871779
NCBI-ProteinID:
XP_025790603
UniProt:
A0A6P6IUN5
LinkDB
All DBs
Position
Unknown
AA seq
298 aa
AA seq
DB search
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPEAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNS
KQSPDEPLRSRKVFVGRCTEDMTADELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDQVA
QSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPVHLISNVYGRSTSLKVVL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatatattcgggtaaccgaagatgagaacgacgagcccattgaaataccatca
gaagacgacgggacggtgctgctgtccacggttacagcccagtttccaggggcctgtggg
ctgcgctaccggaatccagtgtctcagtgtatgagaggcgtccggttggtggaaggaatt
ctgcatgctcccgaagccggctggggaaatctggtatatgttgtcaactatcccaaagat
aacaaaagaaaaatggacgagacggatgcttcttcagcagtgaaagtgaaaagagctgtc
cagaaaacatctgatttaatagtgttgggtctcccgtggaaaacgactgaacaggatcta
aaagaatattttagtacctttggagaggttcttatggttcaggtcaagaaagatctcaaa
actggtcattcaaaggggtttggttttgttcgttttacggaatatgaaacccaggtgaaa
gtaatgtcacagcgacatatgatagacggacgatggtgtgactgtaaacttcctaattct
aagcaaagcccagatgagcctttgagaagcaggaaggtgtttgttgggcgctgtacagag
gacatgaccgctgatgagctgcagcagtttttttgccagtatggagaagtggtagacgtc
ttcattcccaaaccgttcagggcttttgccttcgtgacgtttgcagacgatcaggttgcc
cagtctctttgtggagaggacttgatcattaaaggaatcagcgtccatatatccaatgct
gaacctaagcacaatagcaatagacagttagaaagaagtggaagatttggtggtaatcca
gttcatctcatttcaaatgtttatggaagaagcacttcattgaaagtagtgctgtaa
DBGET
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