Phocaeicola coprophilus: I6J50_01610
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Entry
I6J50_01610 CDS
T07209
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I6J50_01610 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcop03400
]
I6J50_01610 (nth)
Enzymes [BR:
pcop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
I6J50_01610 (nth)
DNA repair and recombination proteins [BR:
pcop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I6J50_01610 (nth)
Prokaryotic type
I6J50_01610 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
TRAFD1-XIAF1_ZnF
Motif
Other DBs
NCBI-ProteinID:
QRO25017
LinkDB
All DBs
Position
complement(380195..380845)
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AA seq
216 aa
AA seq
DB search
MRKKELYEKVITYFQQAMPVAETELHYENPFQLLIAVILSAQCTDKRVNMITPPLFRDFP
TPEALAASTPEVIFEYIRSVSYPNNKSKHLVGMAQMLVKDFHGEVPDTLEQLVKLPGVGR
KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPQTCTTPLATEKYLIKYIPEELIPTAHH
WLILHGRYVCTARSPKCESCGLNGLCKESLKARIPR
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagaaagaattatacgaaaaagtcatcacctatttccagcaggccatgcctgtg
gctgaaacggaactgcactacgaaaatccttttcagctcctcatcgcagtgatcctcagt
gcacaatgtacagacaaacgggtcaacatgattacgcctcccctgttccgggactttccg
actccggaagcactggctgccagtactcctgaagttatctttgaatacatacggagtgtg
agttaccccaataacaagtccaagcacctggtcggcatggcacaaatgctggtgaaagat
tttcatggagaagtgcccgacacactggaacaactggtcaagcttcccggagtgggacgc
aagacggccaatgtgatccagagtgttgtcttcaacaaagcggctatggctgtcgacacc
cacgtatttcgcgtaagtcaccgcatcggactggttccccagacctgtaccactccactg
gccacagaaaaatatctcatcaaatatattcccgaagaattaataccgaccgcacatcat
tggctgatccttcacggacgctatgtctgtacggcacgtagtccgaaatgtgaatcatgc
ggtctgaacggactttgcaaggaatcgctcaaagcccgcatcccccgataa
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