Phocaeicola coprophilus: I6J50_03690
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Entry
I6J50_03690 CDS
T07209
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcop
Phocaeicola coprophilus
Pathway
pcop01501
beta-Lactam resistance
pcop01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcop00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6J50_03690
01503 Cationic antimicrobial peptide (CAMP) resistance
I6J50_03690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcop03036
]
I6J50_03690
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcop02000
]
I6J50_03690
01504 Antimicrobial resistance genes [BR:
pcop01504
]
I6J50_03690
Chromosome and associated proteins [BR:
pcop03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
I6J50_03690
Transporters [BR:
pcop02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
I6J50_03690
Antimicrobial resistance genes [BR:
pcop01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6J50_03690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_CzcB
BSH_CusB
BSH_RND
BSH_YknX
Biotin_lipoyl
HH_MFP_RND
HH_AAEA_pHBA
HH_AprE
YknX_C
Beta-barrel_RND_2
HH_CzcB
Apyrase
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
QRO25383
LinkDB
All DBs
Position
859838..860986
Genome browser
AA seq
382 aa
AA seq
DB search
MKMYFHKVVALSCMTGLLPACQSASDKKVGGDETIPVTLLQPTTIELPRSYVADIQAIQF
VEIKPKVEGFVEQVLVDEGELVKKGQPLFRLSSENYAEAVKEAEANYKQAQAELEMANYE
TERVQRLVEKQIFSSIRLDQVKREQEVVRMKVEQARAQWQRAQMDYGYTTIVSPFAGYVD
RIPYKVGSLVNPESLLTTVSDISEVFAYYKVNESEYLRFKRAQLKGENLQQEDNVELVLA
DGMVYSHKGRQETVEGDFERGTGSIAFRVRFPNPDGLLKHGVTGKVRMLTRMEDVCLVPQ
KSTFEIQDFTYVYLVDSLGVAKVRSFDPIERYQNYYITQDLQPNTAIVYEGVQMVKDGMS
IRVDTVAFEDVRKELHLDNLQR
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgtattttcacaaggtagtggctttgtcgtgtatgacagggctgcttcctgct
tgccagtcagcaagcgacaagaaggttgggggagatgaaacaataccggtgaccttactg
caaccgaccacgattgaattgccgcggtcgtatgtggccgatatccaggctatccagttt
gtagaaataaagccgaaagtggaaggctttgtagaacaggtactggtggacgaaggagaa
ctcgtcaagaaaggacagccgctgttccgtttgagttcggaaaattatgcggaggccgtc
aaagaagctgaagcgaactataagcaggctcaggctgagctggaaatggcaaattatgag
actgaacgtgtacagcgtctggtggagaaacagattttctcttccatccgtctggatcag
gtgaagcgtgaacaggaagtggttcgtatgaaagtggaacaggcacgcgcacaatggcag
cgtgcacagatggactatggctatacgacgattgtatctccttttgccggatatgtagac
cgtataccatataaggtgggaagtcttgtgaatcctgaaagtctgctgaccaccgtcagt
gatatttctgaggtctttgcttactataaagtgaatgagagcgaatacctccgtttcaag
cgggctcagctgaagggagagaatctgcagcaggaagacaatgtggaactggttctggcc
gacggaatggtgtacagtcataaaggacggcaggaaaccgtggagggagactttgaaaga
ggtaccggctccattgctttccgtgtgcgtttcccgaaccctgacggactgctgaaacac
ggtgtgacgggtaaggttcgtatgctgacacgcatggaggatgtctgtctggttccgcag
aaatctacttttgaaatccaggatttcacctatgtttatctggtcgattcgctgggagtg
gccaaagtccgcagcttcgatcccatcgaacgttatcagaactattacattactcaggac
ttgcagccgaatacagccattgtatatgaaggagtccagatggtgaaagacggaatgagc
atacgtgtagatacggtagcgtttgaagatgtgagaaaagaacttcatctggataacctt
caacgataa
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