Propithecus coquereli (Coquerel's sifaka): 105824137
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Entry
105824137 CDS
T08746
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pcoq
Propithecus coquereli (Coquerel's sifaka)
Pathway
pcoq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcoq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105824137 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcoq03041
]
105824137 (EFTUD2)
Spliceosome [BR:
pcoq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105824137 (EFTUD2)
Complex C
U5 SnRNP specific factors
105824137 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
105824137
NCBI-ProteinID:
XP_012516959
Ensembl:
ENSPCOG00000020029
UniProt:
A0A2K6FRE0
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKSKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacactgacttgtatgatgagtttgggaattatattggaccagagctcgattctgat
gaagatgatgatgaattgggcagagagactaaagatcttgatgagatggacgatgatgat
gacgatgatgacataggtgatcatgatgacgatcaccctgggatggaagtggtgctgcac
gaggacaagaagtactacccgacagccgaggaggtgtacggtcctgaggtggagaccata
gttcaggaggaagacacacagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattaccagtcacagtatatgaaatggatttcttggcg
gatctgatggataactcggagctcatcagaaatgtgaccctttgtggccatctccaccat
ggcaagacgtgttttgtagattgtttaatcgagcagactcacccagaaatcagaaagcgc
tatgaccaagatctgtgctatactgacatcctcttcacagagcaagagagaggtgttggc
atcaagagcactcctgtgacagtggtcttgccagataccaaaggaaaatcttatctattc
aatatcatggacaccccaggacatgtgaatttttctgatgaggtcacagctggcttgcgc
atctcagacggagtggtccttttcatcgatgctgctgagggggtgatgctgaacacagag
cggctgatcaagcacgcagtgcaggagaggctggcggtcactgtgtgcatcaacaagatt
gaccgtctgatcctggagctgaagctgcctccgactgatgcttactacaagctgcgccac
attgtggatgaggtcaatggattaataagcatgtattccactgatgagaacctgatcctg
tcgccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctacgccgacaccttcggtgacattaattaccaggaatttgct
aaaagactctggggtgacatctacttcaaccctaagacgcgaaagttcacaaaaaaggcc
ccaaccagcagctctcagaggagctttgtggagtttatcttggagccactttataagatc
cttgctcaggttgtgggtgatgtggacaccagcctcccgaggaccctggacgagcttggc
atccacctgaccaaggaggagctgaagttgaacatccgccccctgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtgcagcatattccttct
ccaaaggtgggcgccaagtccaagattgagcacacctacactggtggagtagactctgac
cttggcgaggccatgagcgactgtgaccctgatggtcccctgatgtgccatactactaag
atgtacagcacagatgatggagttcaatttcatgcctttggccgggtgctgagtggcacc
atccatgctgggcagcctgtgaaggtgctaggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctttggatctctgtggccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcgaccataactgaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaataccacatctgttatcaagattgctgtggagccagtcaacccctcagagctg
cccaagatgctcgatggtctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggtgagcatgtgatcctgggtaccggggagctctacctggactgtgtg
atgcacgatttgcggaagatgtactcggagatagacatcaaggtggctgacccagttgtc
acgttttgtgagacggtggtggaaacatcctctctcaagtgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctcgcggaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttcttccagacc
aagtacgactgggatctgctggctgcccgttccatctgggcttttggcccagatgccact
ggccccaacatcctagtggatgatactctgccttctgaggtggataaagccctccttggc
tcagtgaaagacagcatcgttcaaggtttccagtggggaaccagggaggggcccctctgc
gatgagttgattcggaacgtcaagtttaagatcctagatgcagtggttgcccaggagccc
ctgcaccggggcgggggccaaatcatccccacggccaggagagtcgtctactctgccttc
cttatggccactcctcgtctcatggagccttactactttgtagaggtccaggcccctgca
gattgtgtctctgcggtttatactgtcctggccaggcgcagggggcacgtgactcaggac
gcacctatcccaggctcccctctctacaccatcaaagctttcatcccggccatcgactct
tttggctttgagaccgatctgcggactcatacccagggacaagccttttccttgtctgtc
ttccaccattggcagattgtacctggtgatcctctggacaagagcattgtcattcgtccc
ttggagccacagcccgctcctcacctggcccgggaattcatgatcaaaacccgtcgaagg
aagggcctcagtgaagatgtgagcatcagcaagttcttcgacgatcctatgttgctggag
ctcgccaaacaggacgttgtgctcaattaccccatgtga
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integrated database retrieval system
