KEGG T08746: 105824944

Propithecus coquereli (Coquerel's sifaka): 105824944

Entry

105824944         CDS       T08746

Symbol

TARDBP

Name

(RefSeq) TAR DNA-binding protein 43

K23600

TAR DNA-binding protein 43

Organism

pcoq Propithecus coquereli (Coquerel's sifaka)

Pathway

pcoq03015

mRNA surveillance pathway

pcoq05014

Amyotrophic lateral sclerosis

pcoq05022

Pathways of neurodegeneration - multiple diseases

Brite

KEGG Orthology (KO) [BR:pcoq00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    105824944 (TARDBP)
09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    105824944 (TARDBP)
   05022 Pathways of neurodegeneration - multiple diseases
    105824944 (TARDBP)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcoq03019]
    105824944 (TARDBP)
Messenger RNA biogenesis [BR:pcoq03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     105824944 (TARDBP)

SSDB

Motif

Pfam:

TDP-43_C TDP-43_N RRM_1 RRM_7 RRM_PARP14_3 RL RRM_5

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

Unknown

AA seq 367 aa
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGI
LHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDL
KEYFSTFGEVLMVQQSLDEPLRSRKVFVGRCTEDMTADELRQFFCQYGEVVDVFIPKPFR
AFAFVTFADDQVAQSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGTPGGFGNQG
GFGNSRGGGAGLGNNQGSNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQS
GPSGNNQSQGNMQREPNQAFGSGNNSYSGSNSGAAIGWGSASNAGSGSGFNGGFGSSMDS
KSSGWGM

NT seq 1104 nt +upstreamnt +downstreamnt
atgtctgaatatattcgggtaacggaagatgagaatgacgaacccattgaaataccgtca
gaagacgatgggacggtgctgctatccacagttacagcccagtttccaggggcatgtggg
ctgcgctacaggaatccagtgtctcaatgtatgagaggtgtccgactggtagaaggaatt
ctgcatgcccctgatgctggttgggggaatctggtatatgttgtgaactatcccaaagat
aacaaaagaaaaatggatgagacagatgcttcatcagcagtgaaggtgaaaagagcagtc
cagaaaacatctgatttaatcgtgttgggtctcccatggaaaacaactgaacaggatcta
aaggaatattttagtacctttggtgaagttcttatggtgcagcaaagcctagatgagcct
ttgagaagcagaaaggtgtttgttgggcgttgtaccgaggacatgactgctgacgagctg
cggcagttcttttgtcagtatggagaagtggtagatgtcttcattcccaaaccgttcagg
gcttttgcctttgttacatttgctgatgatcaggttgcccagtctctttgtggagaggac
ttgatcattaaaggaatcagcgtccatatatccaatgcggaacctaagcacaatagcaat
agacagttagaaagaagtggaagatttggtggtactccaggtggctttgggaatcagggt
ggatttggtaatagtagagggggtggagctggcttgggaaacaatcaaggtagtaatatg
ggtggcgggatgaactttggtgctttcagcattaatccagcaatgatggccgcagcccag
gcagcgctgcagagcagttggggtatgatgggcatgttagccagtcagcagaaccagtcg
ggcccatcaggtaataaccaaagccaaggcaacatgcagagagagccaaatcaggccttt
ggctctggaaataactcttatagtggttctaattctggtgcagcgattggttggggatca
gcatcaaatgcagggtcaggcagtggttttaacggaggctttggctcaagcatggattcc
aaatcttctggctggggaatgtag

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