Poriferisphaera corsica: KS4_28080
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Entry
KS4_28080 CDS
T06996
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pcor
Poriferisphaera corsica
Pathway
pcor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KS4_28080 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcor03400
]
KS4_28080 (pdg)
Enzymes [BR:
pcor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KS4_28080 (pdg)
DNA repair and recombination proteins [BR:
pcor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KS4_28080 (pdg)
Prokaryotic type
KS4_28080 (pdg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
TPR_6
Motif
Other DBs
NCBI-ProteinID:
QDU34734
UniProt:
A0A517YWX7
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All DBs
Position
3237653..3238435
Genome browser
AA seq
260 aa
AA seq
DB search
MPKKKATKKKSSRSYAPPTYTPAEKRRAKTIYNKLLELYPDAHCALIHKNPWELLVATIL
SAQCTDVLVNKVTPDLFRAYPTPQATAKADLEDIRNLVNKVNFWQNKAKSIHNAAKMVVT
DFNGAVPTSMDELIKLPGVARKTANVVLGNAFNINHGVVVDTHIARLSHRYNFTKHKDPK
KIEQDLMALFPRDTWTMLAHLLIYHGRQVCKSRHALCDQSPLCTKYCSNAKIVATERANK
TKKKAVKKKATKKKAKIKIS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaaaaaagctaccaaaaagaaatcctctcgcagctacgcacctcccacctac
acccccgcagaaaaacgccgcgccaagaccatctacaacaaacttctcgaactctacccc
gatgctcattgcgccctcatccacaaaaacccatgggaactactcgtcgccaccatcctc
tccgctcaatgcaccgacgtgcttgtcaacaaagtaaccccagatctatttcgcgcttac
cccaccccgcaagccaccgccaaagccgaccttgaagacatccgcaacctcgtcaacaag
gtcaacttctggcaaaacaaagccaagtccatccacaacgccgccaagatggtcgtcacc
gacttcaatggagccgtccctacttcaatggacgaactcatcaaacttccgggggtcgcc
cgcaaaaccgccaacgtcgttcttggcaacgccttcaacatcaaccacggcgtcgtcgtc
gacacacacatcgcccgcctctcacaccgctacaacttcacaaagcacaaagaccccaaa
aaaatcgaacaagacctcatggccctcttcccccgcgacacatggaccatgctcgcacac
ctactcatctatcacggccgccaagtctgtaaatctcgacacgccctctgtgaccaatcc
cctctctgcacaaaatactgctcaaacgccaagatagtcgccaccgaacgcgccaacaaa
accaagaaaaaagcagtcaaaaagaaagctacaaagaagaaagccaaaatcaaaatctca
taa
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