Pyrus communis (pear): 137707563
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Entry
137707563 CDS
T10779
Name
(RefSeq) DNA repair protein RAD16 isoform X1
KO
K15083
DNA repair protein RAD16
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137707563
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
137707563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_2
DEAD
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
137707563
NCBI-ProteinID:
XP_068302560
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Position
11:complement(20393824..20399788)
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AA seq
875 aa
AA seq
DB search
MELRSRKRTAGPSSDGNEQHEEKEDAYSPSDEDTYVPSTPSASDFESEEGEEYQNNVEVV
FDLNDKPNGKMKEPAIKKSKVVVVENKTEAGGPSSMVPAARFTSGEIDDLGLHDKKKKKN
RKSGVQKRRWQWNTWEEEHDKWLDDNVTEDFDLDTQKNVICDAAEAPSDMIMPLLRYQKE
WLSWAMKQEETETRGGILADEMGMGKTIQAITLVLAKREFNSTCYDTGSSTSFPRIKTTL
VVCPVVAVSQWVSEIERFTSKGSTKVLVYHGANREKSSQIFSGYDFVITTYSIVEADYRK
NVMPPKQKCQYCGRLYYEKKMSTHLKYFCGPNAFRTEKQSKQQRRKHPQPVSQKTVESKG
KNGASRKSSALNEEDDMDSEDIGQRLSLDKSVLHSVKWNRIILDEAHYIKSRRCNTAKAV
LALESSYKWALSGTPLQNRVGELYSLIRFLQLVPYSYYLCKDCDCRTLDHSSAAQCSNCP
HNSVRHFCWWNKYVATPIQIYGNHIQGKRAMYLLKHKILKNIVLRRTKKGRAADLALPPR
IVSLRRDTLDITEQGFYESIYNDTQSQFNAFVEEGTVMNNYAHIFDLLTRLRQAVNHPYL
VVYSASAALRNGSNINVNEKFCGICHEAAEDLVVTACEHAFCKACLLDFAASLGQVSCPT
CSKPVTVDFTTAPSAAIQTKTTIKGFRSSSILNRIKLENFQTSTKIEALREEIRSMVEKD
GSAKGIVFSQFTSFLDIINYSLQKSGVNCVQLVGSMTMSARDNAIKRFTEDPDCRIFLMS
LKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIMRFVIENTIEDRIL
KLQEKKELVFEGTIGGASDALAKLTEADLRFLFVT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgttctcgcaagcgcaccgccggcccttcttccgatggaaatgagcaacac
gaggaaaaggaagatgcttattcaccgtctgatgaggatacttatgtaccgtctacgcct
tccgcttctgattttgagagtgaagaaggtgaagagtaccaaaacaatgtggaagttgtt
tttgacttgaatgataaacctaatggtaaaatgaaggagcctgcgataaaaaagtcgaag
gtggtggtggtggagaacaagacagaagcaggaggaccaagctcgatggtgccagcagcc
aggttcacatcaggtgaaattgacgatcttgggttgcacgacaaaaaaaagaaaaagaat
cgtaaatctggggtgcaaaagcggcgttggcagtggaatacctgggaagaggagcatgat
aaatggcttgatgacaacgtaactgaagattttgatctggatactcagaagaatgtgata
tgcgatgctgctgaggcaccatctgatatgattatgcctttgctaaggtaccagaaggaa
tggttgtcatgggccatgaaacaggaagagactgaaactagaggaggaatcctagcagat
gagatgggaatggggaagactattcaagccattactcttgtcctcgctaaacgggaattt
aattcgacatgttatgacactggttcttccacaagctttcctagaatcaaaaccaccctt
gtagtttgccctgtagttgctgtgagtcaatgggtgagtgaaatagagcggtttacttca
aaaggaagtacaaaggttttggtttatcatggggctaatagagagaagagttcccaaatt
ttctcagggtatgattttgtcattactacatactctattgttgaggctgactacaggaag
aatgtgatgcctcccaaacaaaagtgtcaatattgtggaaggttgtattacgagaagaaa
atgtcaactcacttaaaatatttttgtgggcctaatgcttttagaactgagaagcagtct
aagcaacaaaggagaaagcatccacaaccagtgtcgcagaagacagttgagtctaaagga
aagaatggagcttccaggaagagctcagcactgaacgaggaagatgatatggattcagaa
gatattggacagcgcttgagcctagataagtcagttttgcattctgtgaagtggaaccgt
atcattttggatgaggcccattacataaaatcaaggcgttgtaatactgcgaaagcagtt
cttgctttagagtcttcatacaaatgggctctaagtggcacaccacttcagaaccgtgtt
ggagaactttattctttgatccgcttcttgcagttagtcccctactcttattacttatgc
aaggattgtgattgcaggactcttgatcatagttccgcagcacaatgttcgaattgccct
cataattcagttagacatttttgttggtggaataaatatgtggcaacaccgatacagata
tatggaaatcatatccaaggcaaaagggccatgtatttgctaaaacacaaaattctaaag
aacatagtcctgcgacgaactaaaaagggcagggctgctgatcttgcactacctcctaga
attgtttcattgaggcgggacaccttggatatcacagaacaaggtttttatgagtcaata
tataatgatactcagtcacaatttaacgcatttgtcgaagagggaactgtgatgaacaat
tatgctcacatatttgaccttctcactcgattgcgacaggctgttaatcatccttacctt
gtggtgtattctgcatctgctgcactgagaaatggaagcaacattaatgtcaatgagaaa
ttctgtggaatttgtcatgaagcagcagaagatctagtggttactgcttgtgagcatgcg
ttttgtaaggcttgcttgcttgattttgctgcttctttgggacaagtctcatgcccgaca
tgctctaaaccagttactgttgatttcactacagcaccaagtgctgctattcagactaag
actaccattaaggggtttagatcttcgagcattttgaacagaattaagcttgaaaatttt
cagactagcacaaaaattgaggctttgagggaagaaatcagatccatggttgaaaaggat
ggctctgcaaaaggaattgttttcagccagttcacatcgttcttggatatcattaactac
tccttgcaaaagtccggtgtcaattgtgttcagttggtgggaagcatgactatgtctgca
agggataatgctataaagagatttaccgaggatccagattgcaggattttcttaatgagc
ttgaaagctggaggtgttgctcttaatctgacagttgcatcgcatgttttcttgatggac
ccatggtggaacccagcagttgagaggcaagcacaagatagaatccaccggatagggcag
tacaaaccgatcagaattatgagatttgtgattgagaacactattgaggaccggattcta
aagctacaggagaaaaaggaattagtgttcgaggggaccatcggtggtgcttcagacgct
cttgcaaaattaacagaagccgacttgagattcctctttgtcacctaa
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