Pyrus communis (pear): 137707721
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Entry
137707721 CDS
T10779
Name
(RefSeq) nuclear pore complex protein GP210
KO
K14314
nuclear pore complex protein Nup210
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137707721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137707721
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137707721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Ig_NUP210_1st
Big_2
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_2nd
Ig_NUP210_16th
Ig_NUP210_3rd
Ig_NUP210_9th
Ig_NUP210_15th
Motif
Other DBs
NCBI-GeneID:
137707721
NCBI-ProteinID:
XP_068302725
LinkDB
All DBs
Position
11:25673296..25685307
Genome browser
AA seq
1969 aa
AA seq
DB search
MDSVRRMNMLRYTVLLGLSLLLVAGQTASHLGSGPHIADVNILLPPRMTHPVEYRLQGSD
GCFKWSWDHHDVLSVLPEYNSTSHCSTSALLRSIAPFSGRKETAVYAADVNTGVVIRCKV
FIDKLSRIQIFHNSVKLDLDGLATLRVRAFDSEENVFSSLVGLQFMWQLETNELPHHLAH
VPLKDSPLSDCGGLCGDLDIQISLEDNGVFSDLYVVKGIEIGHEIVSVNLLEPRFQHMTD
RITLTVAEAMSLDPPSPVFVLVGAAVQYSLKIIRGNKAQVVTLPSPHHRWSVSNSSVARV
DSMMGLANAFSLGITNTIVEDTRVAGHIQVSSLNVVLPDSLSLYMVPLSTSGDLVEGIEA
IPSMTRWYGVSGRQYLIQMKVFSQGPDAQEIYLTESDDLKLSSDQSDYWRLSPVSNNIAI
KHGWQNSMILKATSQGQGKLAASLTYFSALNEKKEVLKVMQEVVVCDQVQFTLDKSGASP
TILLPWAPSVYQEVELKATGGCAKASSDYKWFSSDMGIVSVSASGVVQAKKPGKATIKVL
SIFDSFNYDEVAIEVSVPASMVMLRNFPVETVVGTHLQAAVTMKASNGAYFYRCDAFSSF
IKWKAGSESFIIVNATVEAPTLDILGNAEFYASSSGPACSRAYLYASVSGRATLHATLSK
EYHNLDGSFSGPVVLKASSLIAAYSPLSIRQAGDGNHFGGYFFDLAQTETDRQLVNLDKI
YLVPGTHLDVMLLGGPEKWNNGIDFVETTDILNEGHGHIDNGASVQWLSDSYKSLYRVSC
QMLGTYKIVFKRGNLVGDGHPLPAVAEVLLYLTCSIPTSIVLLADEHVNEREVIRTAIQA
DRSSGKIRVTPVTVANGRTIRLAAVGISNSGEVFANSSSLSLRWELINCGEMASWDDADD
LERPEHSWERLLSLKNESGLCIVRATVIGFRDNMGAHKSVPLLEDSDNVLTDAIRLQLVS
TLIVSPEFNLVYFNPNAKLNLSITGGSCFLEATVNNSRVLEVVQAPTGLQCSQLILSPKA
MGTALVTVYDIGLAPPLTASAVVQVVDIDWIKIVSPEEISLMEGNSQTIDLMAGISDGRT
FDAYQFAYMNIHVHVEDHIIEVLDINDISSPGGGFVNIPKFKILATHLGITTFFVSAVQQ
SGHEILSQPIMVEVYAPPVIYPQEIFLVPGASYVLTVKGGPTVGVYVEYMSLDDEIVTMH
RSFGRLSALSPGNTTIRATFFRNGDIVICEAYGSVKVGVPSSVTLNAQSDLLGVGHEMPI
YPLFSEGDLFSVYELCQNYRWTIEDEKVLSFYLEHFTGEKYGSQLERSEKIQFPSHMSEE
ELGFIKVISGRFAGRTNVAVSFSCEFISSGSKSWRRAYNASLSISVVPDLPLALGVPITW
VLPPHYTTTSILPSSSELHGQRDTQSHKGIIIYSLLKNLPEKNEGVQKDAISIDGDRIKT
SESNNLACIQAKDRMTGRIEIAACIKVAEVSQIRITNKELPFHGINLAVGAEISLPVVYL
DVIGNPFYEAHGAILFDVATNSPDVVSINNSSNTHVGGGNIHLKAMRHGRALVRISIHRM
PQKSDYILISVGAHIHPQNPVLRTGSHLNFSIEGLNDEISGRWGTANGSVISVSPLSGVA
EVVGEGTTQVYFEASSLKLRTTVIVPTEDIISVDAPTETLTNVPFPTKGYNFHVKISSDN
KFKALGNTKELQYDCRVDPPFVGYAKPWLDLDTGSSYCRFFPYSPEHLVRLVPKSKDMKS
DISVSINASLREADHVSGSASALFVGGFSILEMGKDSIQLKLTPDSNKTTITILGNTDVE
IYWHERDSLLITLIHKEGSGIGGHAKYEVRMLGSKRFKDTIFITLPANGQSVEIDVNGNP
GDKTASETTINHTPWATLLGCLALSGLTVAFTICYSANRLDRSQTSINAPATPSTAGPAT
PERTSSPAAGSEQSPRTPQPFIDYVRRTIDETPYYRREPRRRVNPQNTF
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atggattcagtgcggcggatgaacatgttgagatacactgttctgctcggtttgtctctt
cttctggtggcgggccaaacggcgtcgcatttgggctccggtccgcacattgcagacgtc
aacattctgctgcctcccagaatgactcatccggtcgagtatcggctccaggggagcgat
ggttgcttcaaatggtcatgggatcaccacgacgttctgtctgttctgccggaatataac
tcaactagtcactgctcgacgagtgcactattgagatcaattgctccgtttagtggccgg
aaggaaactgctgtttatgctgctgatgtaaatactggagttgtgattcgctgcaaagtt
tttattgacaagctttctaggattcagatatttcataattctgttaaacttgacttggat
gggcttgccacgcttcgagttcgtgcctttgacagcgaagaaaatgtgttttcgtcactg
gtgggattgcaatttatgtggcagctggaaaccaatgaactgcctcaccaccttgctcat
gttcctctaaaggattctcccctgagtgactgtggtgggttgtgtggagacctagatatc
caaataagccttgaagataatggtgtattttccgatctgtacgttgtaaagggaatcgaa
attgggcatgagattgtttctgtaaatttgcttgagccacgattccagcacatgactgac
agaattactcttactgtagcagaagccatgtcacttgatcctccctcacctgtttttgtc
ctcgttggtgctgctgttcagtatagtctaaaaattatccgtgggaacaaagctcaagtg
gtaactttgccgtctccacatcatcgatggtctgtttcaaactcttctgttgctcgtgtg
gactctatgatgggtttggctaatgcgtttagcttaggaattacaaacaccatagttgaa
gatacaagggttgctggccacatacaagtgtcgtcacttaatgttgttctgccagattct
ttatctttatacatggtacctttgtctacttctggcgatcttgttgagggaatcgaagca
attccatccatgacacgttggtatggtgtttctggccgtcagtacctcattcaaatgaag
gttttctcacaaggtccagatgcacaagaaatctatcttacagagagtgatgatttaaag
ttgtccagtgaccagtctgactactggagactttctcctgtatcaaacaatattgcaatc
aaacatggctggcagaattctatgatcctgaaggcaacttcacagggacagggtaaattg
gcagcatctttgacttactttagtgcattaaatgagaagaaggaggttctcaaggtcatg
caagaagtcgtggtttgtgatcaagttcagtttactttggataaaagtggtgcatctcca
accattctccttccgtgggccccttctgtttatcaggaggtggagctaaaggctacagga
ggttgtgctaaagcatccagtgactacaaatggttctcttcagacatgggtatcgtgtct
gtatctgcttctggggttgtccaggctaagaagcctggtaaagctaccattaaagtgcta
tccatttttgattcatttaattatgatgaggttgccattgaagtctctgttccagcatct
atggtcatgctccggaacttccctgttgagactgttgtaggaacacatcttcaagctgct
gtaacaatgaaagcgtcaaatggtgcctacttttatagatgtgatgcattcagttccttc
ataaagtggaaagcagggagtgagtctttcattattgtcaatgcaacagttgaggcaccc
actttagacattttagggaatgctgagttctatgcatcaagttctggtcccgcatgttca
cgggcatatttatatgcctcggtttctggtcgagcaacccttcatgctacattatcaaaa
gaatatcacaacttggatggctcttttagtgggcccgttgttttaaaagcatcttcactt
attgcggcatattcaccgcttagcattcgtcaggcaggtgatggaaaccattttggtggc
tacttttttgatttggctcaaacagaaactgataggcagttggtaaatttggacaaaata
taccttgtccctggaacgcatctggatgttatgcttcttggtggacctgaaaagtggaac
aatggtattgactttgttgaaactacggatatcttaaatgaaggacatggtcatattgac
aatggggcttctgtgcaatggttatctgatagctataagagtctgtacagagtttcatgt
caaatgctgggaacctataaaattgttttcaaacgtggtaatctggttggggatggccat
cctctacctgcagtagcagaagttctgctgtatcttacgtgtagcattcctacctcaatt
gttctgctagctgatgaacatgtaaatgaacgtgaagttatacggactgcaattcaggct
gatcgcagttctgggaaaatccgtgtcacccctgttactgtggcaaatgggcgcaccatc
agattagctgctgttggtattagtaactctggagaagtgtttgcaaactcatcttctctt
tccttgaggtgggaacttatcaattgtggcgagatggctagttgggatgatgctgatgat
ttagagaggccggagcacagttgggagaggttattgagcttgaaaaatgagtcaggcctg
tgtatagttcgtgctactgtcattggtttcagagataacatgggtgctcataagtctgtt
ccactgcttgaggattcagataatgttcttacagatgcaattcgtctacagcttgtttct
acattaattgtcagcccagagttcaatctggtgtatttcaatcccaatgctaagttaaac
ctgtcaattactggtgggagctgtttcttggaagctactgtgaataattctcgagtactg
gaagtcgttcaagccccaacaggtttacagtgctcacaactgatcctgtctcctaaagct
atggggacggcacttgtgacagtttacgatattggacttgctcctccccttacggcttct
gctgtggtacaagttgtagacattgactggataaagattgtgtcaccagaggaaataagc
cttatggaagggaactcgcagactattgatttgatggctgggattagtgatgggaggact
ttcgatgcttatcagtttgcctacatgaatattcatgtgcatgttgaggatcatattatt
gaggtgttagacattaatgatatctcaagcccaggtggtggatttgttaatatcccgaaa
tttaagattttggctacacatcttgggatcaccactttctttgtgagtgctgtacaacaa
tctggacatgaaattttgagtcaaccaataatggtggaagtctatgcaccacctgtaatc
tacccacaagaaattttccttgtacctggagcatcttatgtgcttaccgtgaaaggagga
ccaacagttggtgtatatgttgaatatatgagtctggatgatgaaatagtgacaatgcat
agatcttttggacggctgtctgctttgtcacctggaaacactactattcgtgccacattc
ttcagaaatggagatattgtgatttgtgaagcatatggcagtgttaaagttggagttcct
tcttcggtgacactgaatgcacaaagtgatctgcttggtgttggccatgagatgccaata
tatcctttattttctgagggtgatttgttttccgtttatgagctctgccaaaactaccgg
tggactatagaagatgaaaaggttttgagcttttatttagagcacttcactggtgagaag
tatggttctcagttggaacgttcagaaaagattcaattccctagccatatgagtgaggaa
gagcttggttttatcaaagtcatatctggaagatttgcagggagaacaaacgttgcagtc
tcgttctcatgtgaatttatatcttctggttccaaatcatggagaagagcttacaatgca
tctctatcaatatcggtggtgcctgatctccctcttgctcttggagtcccaataacctgg
gttcttcctcctcattatactacaacaagtattttaccttcatcttcagaattgcatggc
caaagggatactcagagtcataaaggaattattatctattccttattaaaaaatctccct
gaaaagaatgaaggtgtgcaaaaggatgctatttccatcgacggagacagaataaagaca
tcagagagtaacaatcttgcatgcattcaggcaaaagatcgtatgacgggtagaattgag
attgctgcttgcatcaaagttgctgaggtgtctcaaataagaattacgaacaaggagtta
ccatttcacgggatcaatcttgctgttggtgctgaaatttctcttccagtagtctacctt
gatgtgataggaaaccctttctatgaagcacacggtgccattctctttgatgttgcaacc
aactctcctgatgttgtgtccataaacaacagcagcaacacgcatgttggcggtggaaat
atccatctcaaggcgatgcgacatggtagagctcttgtgcggatatccatccatcgtatg
cctcagaagtcggactatatcctgatatcagtgggtgctcatatacatcctcaaaaccca
gttcttcgaacaggaagccatcttaacttcagtatagaaggcttaaatgatgaaatttct
ggccgttggggaactgcaaatggaagtgtcatatctgtatccccattgtctggggtggct
gaagtagttggggaaggtacaactcaagtatattttgaagcttcaagtttgaagttgcga
acaacagttatagtgccaacagaggatattatttctgtggatgctccaactgagacacta
acaaatgttcccttcccaactaaaggatataacttccatgtgaagatcagtagtgacaac
aagtttaaggcgcttggaaacactaaggaactccagtatgactgcagagttgacccgcct
tttgttgggtacgcaaaaccatggttagatcttgataccggtagttcatactgccgcttt
tttccttactcaccggagcatctggttcgtttggtacccaagtcaaaggatatgaaatca
gatatatctgtttccatcaatgcttcactgagagaagcagatcatgtttccggatctgct
tctgctctttttgttggagggttttccattttagagatgggcaaggattcaatacagttg
aagctgaccccagactctaacaagactactattacaatcctgggaaacacagatgttgaa
atctattggcatgagcgggattctttactcattactctcatccataaagaaggttctggg
atcggtgggcatgcaaaatatgaggtcagaatgctaggatccaagagattcaaagataca
attttcattacacttccagccaatggtcagagtgtggaaattgatgtcaacggcaaccct
ggagataaaacggcatctgaaactaccatcaatcatacaccttgggcaacgttgcttgga
tgtcttgctctatcgggtttgacagttgccttcaccatatgttattcggcgaacagactg
gatagatctcaaacatccattaacgctccagccactccaagcactgcaggcccagccaca
cccgaacgtactagcagcccagctgctgggagcgaacagtctcctcgaacacctcagccg
ttcatagattacgttagaagaacaatagatgaaactccatactacaggcgagagccgcgg
aggagagttaatccacagaatacgttctag
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integrated database retrieval system
