Pyrus communis (pear): 137725497
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Entry
137725497 CDS
T10779
Name
(RefSeq) transcription factor PIF1-like
KO
K16189
phytochrome-interacting factor
Organism
pcox Pyrus communis (pear)
Pathway
pcox04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137725497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcox03000
]
137725497
Transcription factors [BR:
pcox03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
137725497
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
137725497
NCBI-ProteinID:
XP_068320304
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Position
2:12408469..12413921
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AA seq
537 aa
AA seq
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MNRRVPDFEMDYDYLLPTTSALNRPRKSTMPEDDIMELLWQNGQVVMQSQNQRSSVNSKR
SHQSKYDVVLPDDGGGITRPTPQPQPQPPAQNPHLFMQDDEMASWLQYPLVDDPFSAGLL
YPDSTTSEHRTPQVLGPAPAPAPASRPPIHRPRRTELQNFLQSDRTNNNRPMMSETAPSS
SKKSVVRETTTVVDSSDTPLVGPSSRALDSRPDGAGGGLANGATSLTAATAATAATSFPG
KEVTTCEMSLTSSPGGSSASASESTEPESAPKPPLTADNRKRQRKGREAAAADDAEFQSK
DVEFESGNGKKQVRGSTSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKA
SMLDEAIVYLKSLQLQVQMMSMGYGMIPMMFPGVQQMMSVPMGMGIGMGMGMGMEMAGIS
RPMMPFPNVIAGSPMPTAAAAHMGPRFPIPPFHMQPIPASDPTGVPAVNQTDQMINSLGA
QNPNQSHMPNFADPYQQFFSPQQMQLPLQHKQAMPQPTTGKPSSNRRPETHENHQSG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggcgcgtccccgatttcgaaatggactacgactacttacttcccaccacctct
gctctgaaccgacccagaaaatcaaccatgccggaagacgatatcatggagctgctatgg
cagaacggccaagtcgtgatgcagagccagaaccagaggtcttcagtcaatagtaaaaga
tcgcaccagtccaaatacgacgtcgtattgcccgacgacgggggcggcatcaccagaccg
accccccaaccccaaccccaaccgccggcccagaacccgcacctgtttatgcaagacgat
gaaatggcctcgtggcttcagtacccgctcgtcgacgaccccttctccgctggcctcctc
tatcccgattccaccacctccgagcaccggacgccccaggttttggggccggcgccggcg
ccggcgccagcttcgaggccgccgatccaccgcccgaggaggaccgagctccagaacttc
ctgcagtccgacaggaccaacaacaacaggcctatgatgtcggaaacggcgccgtcgagc
tcgaagaagagcgtggtaagggagacgacgacggtggtggattccagcgacactccgctg
gtgggcccaagctctagggctttggattctaggcccgacggcgctggtggcggcttggct
aatggagcgacgtcgttaaccgctgcaaccgctgcaaccgctgcgacgtcgtttcctgga
aaagaagtgaccacgtgtgagatgtcgctgacgtcgtctccaggaggctccagcgcgagc
gccagtgagagcaccgagccagagtcggctcccaagccgccgctgactgccgataaccgg
aagcgccagcggaaagggagggaagccgccgccgccgacgacgccgagtttcaaagcaag
gatgtcgagtttgaatctggcaatggaaagaaacaagtccgaggatcgacatcatctaca
aagagatcgcgagctgcagaggtccacaatctctccgagaggagacgtcgagatagaata
aatgaaaagatgaaggctttacaagaactaatacctcgatgcaacaagtcggacaaagca
tcaatgctggatgaagcaattgtgtacttgaaatctctccagttacaagtacagatgatg
tccatgggatacggcatgatccctatgatgtttcctggagttcagcagatgatgtccgtg
cccatggggatgggaattggaatgggcatgggcatgggaatggaaatggccggcatcagt
cgcccaatgatgccatttccaaatgtaatagccggttcacccatgccaacagcagctgct
gcacatatgggacctaggttccctataccaccatttcacatgcagcctattcctgcaagt
gatcctaccggagttccagcagtcaaccagacagatcaaatgataaactcgctcggggca
caaaatccaaaccaatcacacatgccaaattttgcagatccttaccagcagtttttcagt
ccccaacagatgcagttgccactgcagcacaagcaagcaatgccccagccaactactggc
aagccgagttccaataggagacccgaaactcatgaaaaccatcaatcaggttaa
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