Pyrus communis (pear): 137725784
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Entry
137725784 CDS
T10779
Name
(RefSeq) ABC transporter I family member 19-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137725784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137725784
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137725784
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
nSTAND3
ORC-CDC6-like
AAA_28
NACHT
AAA_15
AAA
AAA_24
PduV-EutP
AAA_18
AAA_23
AAA_22
nSTAND_NTPase5
AAA_25
AAA_5
Arf
AAA_14
AAA_33
SRP54
AAA_30
Sigma54_activat
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
137725784
NCBI-ProteinID:
XP_068320669
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Position
2:11399124..11401431
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AA seq
286 aa
AA seq
DB search
MAEEASSGIRVQGMQFAYDAQPLFCDFNLEITPGSRCLLIGANGSGKTTLLKILAGKQMV
GGRDVVRVLNCSAFHDTHLVCSGDLAYLGGSWTKTVGSAGELPLQGDFSAEHMIFGVEGT
DPVRRDKLIELLDIDLRWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMD
LLDFFKEECEQRGATIVYATHIFDGLETWATHLAYIQDGELKRAEKLSEVNELKSSVNLL
SVVESWLRAETKSDKKKSSNPPAQMKKASPFASSPFTSSRHMAYYR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggcatcgagcggcatcagagtccagggcatgcaatttgcgtacgacgcg
cagcccctcttctgcgatttcaacctcgagataacccctggatcccgatgccttctcatc
ggcgccaatggatctggtaagaccacgttgctgaagattctagctgggaagcagatggtg
ggagggagagatgtggtgcgagtgttgaattgttcagcttttcatgacacgcatttggtt
tgcagtggcgatttggcttacttgggtggctcttggaccaaaactgttggctctgctgga
gaacttcccttgcagggagatttctcagctgagcatatgatttttggagtcgaagggact
gatcctgttaggagagataagttgattgagctgcttgatatagacctgcggtggagaatg
cataaagtatctgacgggcaacggcgtcgagtccaaatctgcatgggacttcttcatccc
tttaaggttctcttgcttgatgaggtaacagtcgacttggatgtcgttgctaggatggac
ttactagatttcttcaaggaagaatgtgagcagagaggagctacaattgtatatgcaacc
catatctttgatgggttggagacatgggcaacgcatctggcttacatccaagacggtgag
ctaaagagggctgagaagttgtcggaggttaatgagttgaagagttcggtcaatctgctc
tctgttgttgaatcctggctccgcgccgagaccaagtctgacaaaaagaaatcctcaaat
ccccctgcccaaatgaaaaaggcctctcctttcgctagttctccattcacgtcatcaagg
cacatggcgtattaccgctga
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