Pyrus communis (pear): 137728868
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Entry
137728868 CDS
T10779
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
pcox Pyrus communis (pear)
Pathway
pcox04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137728868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcox03000
]
137728868
Transcription factors [BR:
pcox03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
137728868
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
137728868
NCBI-ProteinID:
XP_068323758
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Position
3:complement(19250901..19259564)
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AA seq
547 aa
AA seq
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MNGCVPDFEMDDDYSLPTSSALNRPRKSTMPEDDVMELLWQNGQVVMQSQNQRSAVNSKK
SHQSKHDVVLPDDGGGITRPASLPQPPAQNPHLFMQEDEMASWLQYPLVDDPFSADLLYP
DSTTSELRQPQVSAPAPSSRLPIHMPRRTEVQNFLHFARPNNNNASSNRPMIPEMAPSSS
KKSVVRETMTVVDSSDTPLVGPSSRALDSRPDGAGGGLANGATPFPTAGTSFPAKEVTTC
EMSLTSSPGGSSESASASAEPMSAQKPPPTADNRKRKGREVAAAADDAEIQCEDVEFESA
NGKKQVRGSTSSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKSDKASMLDEAI
EYLKSLQLQVQMVSMGCGMVPMMFPGVQQMMSMPMGMGIGMGMGMGMGMEMASINRPMMP
FPNVIGGSPMPTAAAHMGPRFPIPPFHMQPIPASDPARVPAVNQTDHMINSLGAQNPNHS
RMSNFADPYQQFFGPQQMQLPLQQQNQAMPQPTTGKPSSSRGPETHENHQSALNPSTKFC
GQRRAGN
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggtgcgtccccgatttcgaaatggacgacgattactcacttcccacttcctct
gctctcaaccgacccagaaaatcaaccatgccggaagacgatgtcatggagctgctatgg
cagaacggccaagtcgtcatgcagagccagaaccagaggtcggcagtcaatagtaaaaaa
tcgcaccagtccaagcacgacgtcgttttgcccgacgacggtggcggcatcaccagaccg
gcctccctaccccagccgccggcccaaaacccgcacctgtttatgcaagaagatgaaatg
gcctcgtggcttcagtacccgctcgtcgacgaccccttctccgcggacctcctctatcct
gattccaccacttccgagctccggcagccgcaggtttcggcgcccgcgccctcttcgagg
ttgccgatccatatgccgaggaggaccgaggtccagaactttctgcacttcgccaggccc
aacaacaacaacgccagcagcaacaggcctatgattccggaaatggcgccatcaagctcg
aagaagagcgtggttagggagacgatgacggtggtggactccagcgacactccgctggtg
ggtccaagctctagggctttggattctaggcccgacggcgctggcggcggcttggctaat
ggagcgacgccgtttccaactgctgggacgtcgtttccggcaaaagaagtgaccacgtgt
gagatgtcactgacgtcgtcgccaggaggctccagcgagagtgccagcgcgagcgccgag
ccgatgtcggctcagaagccgccgcctactgccgataaccggaagcggaaagggagagaa
gtcgccgccgccgccgacgatgccgagattcaatgtgaggatgttgagtttgaatctgcc
aatggaaagaaacaagtccgaggatcgacatcatctacaaagagatcgcgtgctgcagag
gtccacaatctctccgagaggagacgtcgagataggataaatgaaaagatgaaggcttta
caagaactaatacctcgatgcaataagtcggataaagcatcaatgctggatgaagcaatt
gagtacttgaaatcactccagttacaagtacagatggtgtccatgggatgcggcatggtc
cctatgatgtttcctggagttcagcagatgatgtccatgccgatggggatgggaattgga
atgggcatgggaatgggaatgggaatggaaatggccagcatcaatcgccctatgatgcct
tttccaaatgtaataggcggttcacccatgccaacagcggccgcacatatgggacctagg
tttcctataccaccatttcacatgcagcctattcctgcaagtgatcctgccagagttcca
gcagtgaaccagacagatcatatgataaactcgctcggggcacaaaatccaaaccattca
cgcatgtccaattttgcagatccttatcagcagtttttcggtccccaacagatgcagtta
ccattacagcagcagaaccaagcaatgccccagccaactactggcaagccgagttccagt
aggggccctgaaactcacgaaaaccatcaatcagctttaaacccgagtacaaaattctgc
ggccaaagaagggcaggaaactag
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