Pyrus communis (pear): 137734081
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Entry
137734081 CDS
T10779
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03420
Nucleotide excision repair
pcox04120
Ubiquitin mediated proteolysis
pcox04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137734081
04120 Ubiquitin mediated proteolysis
137734081
09124 Replication and repair
03420 Nucleotide excision repair
137734081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137734081
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137734081
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
137734081
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
137734081
Multi subunit type E3
SCF complex
Ring finger protein
137734081
Cul2 complex
137734081
Cul3 complex
137734081
Cul4 complex
137734081
Cul7 complex
137734081
Cul8 complex
137734081
Cul9 complex
137734081
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
137734081
TCR (transcription coupled repair) factors
Cul4-CSA complex
137734081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
137734081
NCBI-ProteinID:
XP_068329454
LinkDB
All DBs
Position
5:15530248..15532579
Genome browser
AA seq
117 aa
AA seq
DB search
MATLDSDVPMIPAGEGSSSAGPSSTKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactggactcagatgttccgatgattcccgcaggcgagggttcgagcagtgca
ggtccttcttcgaccaagaagcccaagcgattcgagatcaagaagtggaatgctgttgct
ctctgggcttgggatattgtggttgataactgtgccatttgcaggaatcatatcatggat
ctctgcattgagtgccaagcaaaccaggcaagtgccacaagcgaggagtgcacggttgct
tggggggtttgtaaccatgcattccacttccactgcataagccgatggctcaagactcga
caagtgtgcccattggataacagcgagtgggagtttcagaagtatggtcactag
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