Pyrus communis (pear): 137740097
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Entry
137740097 CDS
T10779
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
pcox Pyrus communis (pear)
Pathway
pcox04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137740097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcox03000
]
137740097
Transcription factors [BR:
pcox03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
137740097
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
137740097
NCBI-ProteinID:
XP_068336003
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Position
7:complement(8532927..8537378)
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AA seq
559 aa
AA seq
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MNSCIPEWNFESDLPLTNQKKSIGPDHELVELLWRNGQVVLNSQTHRKPSFNPNDQSRQV
QKHDQQSIRSGGLYGNSSNPIQDDDTVSLIHYPLEDSFDKEFCSHFFSEFPSCDPIELDK
PIKQFEGEKVVKFDASDTARLVSNSPRPNGKSSAGVEYAANPMPPPRYQYINSTDQQNQN
QGGVGKIVNFSQFATPGRVSAGSSRGQLGGKESGNLAQAEVRECSVMTVGSSYVGSNQVL
NDLDVSRASSNCDGTTGLSAGHFYDNVHKIMPQSETGKTDTLDPTLTSSSGGSGSSFGRG
GNQSNVVNSNKRKGREAADSECQSEAAELESASAARSKSAHRSGSTRRSRAAEVHNLSER
KRRDRINEKMKALQELIPHSNKTDKASMLDEAIEYLKSLQMQLQVMWMGSGMAPMMFPGV
QHYISRMGMGMGMGMGMGPPALPSMQNPMHLPRHPLVDQCMNVAPAANQTVMCQPPVLNP
IDYHNQMQNPSFQEQYVRLMNFHHMQTMSQPMNMFRFGSQPLQQNKMMAPNGFSSGPFGG
GAATNDPLSGKMSKSLEST
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaattcttgcattcccgagtggaactttgagtctgatctccccttgaccaaccagaag
aaatcaatagggccagaccatgaacttgtagagctcttgtggagaaatgggcaagtagtt
ttgaacagccaaacgcatcgaaaaccaagttttaatccgaatgatcaatcgagacaagtt
cagaaacatgatcagcaatcaataaggtctggggggttgtatgggaattcaagtaatccg
attcaagatgatgacaccgtttcccttatccactacccgcttgaggattctttcgacaaa
gagttttgttcccattttttctctgaattcccttcctgtgatccaattgagcttgacaaa
ccaatcaaacagtttgagggagagaaggttgtgaagtttgatgcttctgacaccgcgcgt
cttgtttccaactcaccgcggcctaatggcaagtcctctgctggtgtggaatacgctgca
aatccaatgcctcctccaagatatcaatacattaattcaactgatcagcagaaccaaaat
caaggaggcgtggggaaaatagttaatttttcgcaatttgcaaccccgggaagggtttca
gcaggatcttctagaggacagttaggagggaaagagtccggaaatttagctcaagcggag
gttagggagtgttctgtgatgacagttggttcgagttacgttggtagcaaccaagttcta
aatgaccttgatgtgagcagggcttcaagcaattgtgatggaactactggtttatcggct
ggacatttctacgacaacgttcataagataatgcctcagagcgagacagggaaaactgat
acacttgatccaacgcttacttcgtcttctggcggttctggtagtagttttggcagagga
ggaaaccagtctaatgttgtcaatagcaacaagagaaagggtagagaggcagcggactcg
gagtgccaaagtgaggctgctgaacttgaatcagcttcagctgcgagaagtaagtcagcg
catcgatcaggatcgaccaggaggagtcgtgctgctgaagtccataacctctcagaaagg
aaacggagagatcggattaacgagaaaatgaaagcattgcaagagcttatacctcattct
aacaagacagataaagcatcaatgttagatgaggcaattgagtacttgaagtcacttcag
atgcaactgcaggtaatgtggatgggaagcgggatggcaccaatgatgtttccgggcgtg
cagcactatatttcccgaatgggaatgggaatgggaatgggaatgggaatgggaccgccg
gccttgccttctatgcaaaatccgatgcatttacctaggcacccgctcgttgatcagtgc
atgaatgtggctccagcagcaaaccagactgtaatgtgccaaccaccggtcttgaatccc
attgattaccacaaccagatgcaaaatccctcttttcaggaacaatacgtgcgtctcatg
aacttccatcacatgcagactatgtctcagccaatgaatatgttcagatttggctcccaa
cctctacaacagaataagatgatggcaccaaatggtttcagcagtggacctttcggtgga
ggagctgcaactaatgaccctttaagtggaaaaatgagtaagtcacttgaaagcacttaa
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