Pseudomonas chlororaphis subsp. aurantiaca: JM49_14155
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Entry
JM49_14155 CDS
T03338
Name
(GenBank) RND transporter
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Pathway
pcp01501
beta-Lactam resistance
pcp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JM49_14155
01503 Cationic antimicrobial peptide (CAMP) resistance
JM49_14155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcp03036
]
JM49_14155
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcp02000
]
JM49_14155
01504 Antimicrobial resistance genes [BR:
pcp01504
]
JM49_14155
Chromosome and associated proteins [BR:
pcp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JM49_14155
Transporters [BR:
pcp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JM49_14155
Antimicrobial resistance genes [BR:
pcp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JM49_14155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
AIS12766
LinkDB
All DBs
Position
complement(3071746..3072903)
Genome browser
AA seq
385 aa
AA seq
DB search
MSKNLFAPFCLLLLAAALSACDKASTAEEQAPLAKVRIETIETRPLSISSELSGRIAAPR
IAEVRARVAGVVLQRTFREGTDVKQGDVLFRIDPAPFKADLDSALASLRKAEANAFQVRL
QEQRYAQLIEDKAISAQEYDNARANARQTAAEVAANQAAVQRARLNLGYATVTAPISGRV
GRALVTEGALVGQNETTPLALIQQLDPIHADLTQSTRELNDLRRAFRAGQLQQVGQDQAK
ATLIQDDGSLYPLPGKLLFADISVDPSTGQIILRSEFPNPDLDLLPGSFIRVRLEQAVNR
QGISVPQRAIQRDSAGIAQVLLVDAEQRVVQRPVQLGAAQQDRWIVSDGLKAGDRIVVEG
LQHARPGEKVQIDDSPLPLAQTTGQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaacctgtttgcgccgttctgcctgttgttgctggcagccgcgctgagcgct
tgtgacaaggcctccaccgccgaggaacaggcgccgttggccaaggtccggatcgaaacc
atcgagactcgcccgctgtcgatcagcagcgaactgagcgggcgcatcgccgcgccgcgt
atcgccgaggtccgtgcgcgggtggccggcgtggtgctgcaacggaccttccgtgaaggc
accgacgtcaaacagggcgacgtactgtttcgcatcgacccggcaccgttcaaggccgac
ctcgacagcgccctggccagcctgcgcaaggccgaggccaacgccttccaggtgcggctg
caggagcagcgctacgcccagttgatcgaagacaaggccatcagcgcccaggaatacgac
aacgcccgggccaacgcgcgccagaccgccgccgaggtagccgccaaccaggccgccgtg
cagcgcgcccggctgaacctgggctacgccaccgtcaccgcgccgatctccgggcgcgtc
ggtcgcgccctggtcaccgagggcgcgctggtgggccagaacgaaaccacgccgctggcg
ctgatccagcaactggacccgatccacgccgacctcacccagtcgacccgcgagctcaac
gatctgcgccgggccttccgcgccggccagttgcagcaggtcggccaggaccaggccaag
gccacgctgattcaggacgacggtagcctctacccgctgccgggcaagctgctgttcgcc
gatatcagcgtcgacccgagcaccggccagatcatcctgcgcagcgagttccccaacccg
gacctcgacctgctgcccggcagcttcattcgcgtgcgcctggagcaggcggtgaaccgc
cagggcatcagcgtgccgcagcgcgccatccagcgcgacagcgccggcatcgcccaggtg
ctgctggtggatgccgagcagcgggtggtgcagcgcccggtgcaactgggcgccgcgcag
caggaccgctggatcgtcagcgacggtctcaaggccggcgaccgtatcgtcgtcgagggc
ctgcagcacgcccgtccgggcgaaaaggtgcagatcgacgacagccctcttccccttgcc
cagaccactggacagtag
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integrated database retrieval system
