Pseudomonas chlororaphis subsp. aurantiaca: JM49_18020
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Entry
JM49_18020 CDS
T03338
Name
(GenBank) conjugal transfer protein TraR
KO
K06204
RNA polymerase-binding transcription factor
Organism
pcp
Pseudomonas chlororaphis subsp. aurantiaca
Brite
KEGG Orthology (KO) [BR:
pcp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
JM49_18020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcp03000
]
JM49_18020
03021 Transcription machinery [BR:
pcp03021
]
JM49_18020
03009 Ribosome biogenesis [BR:
pcp03009
]
JM49_18020
Transcription factors [BR:
pcp03000
]
Prokaryotic type
Other transcription factors
Others
JM49_18020
Transcription machinery [BR:
pcp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
JM49_18020
Ribosome biogenesis [BR:
pcp03009
]
Prokaryotic type
rRNA transcription factors
JM49_18020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-dskA_traR
DksA_N
Motif
Other DBs
NCBI-ProteinID:
AIS13477
UniProt:
A0AAJ1E1F0
LinkDB
All DBs
Position
complement(3955737..3956141)
Genome browser
AA seq
134 aa
AA seq
DB search
MTKEKLLAMPADDYMNAEQLAFFTELLQAMKVETHERIEQNRIAIESLDTPADPADAASV
EEERTWLVNAIDRDQRMLPQLEQALGRIGDDSFGWCDDSGEPIGLKRLLISPTTKYCIEA
QERHEQIDKHQRQA
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggaaaagttgctggccatgccggcggatgactacatgaacgccgagcagctg
gcttttttcactgagctgttgcaggccatgaaggtcgaaacccacgagcgcatcgaacag
aaccgaatcgccattgagagcctggacaccccggccgaccctgccgacgcagcttccgta
gaggaagagcggacctggctggtcaacgctatcgaccgcgaccagcgcatgctgccgcaa
ctggagcaggccctgggccgtatcggcgacgacagcttcggctggtgcgacgacagcggc
gagccgatcggcctgaaacgcctgctgatcagcccgaccaccaagtactgcatcgaagct
caggaacgtcacgagcagatcgacaagcaccagcgtcaggcctga
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