Pseudomonas citronellolis: PcP3B5_18550
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Entry
PcP3B5_18550 CDS
T04637
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
pcq
Pseudomonas citronellolis
Pathway
pcq00220
Arginine biosynthesis
pcq00250
Alanine, aspartate and glutamate metabolism
pcq00430
Taurine and hypotaurine metabolism
pcq00910
Nitrogen metabolism
pcq01100
Metabolic pathways
pcq01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pcq00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
PcP3B5_18550 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PcP3B5_18550 (gdhB)
00220 Arginine biosynthesis
PcP3B5_18550 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
PcP3B5_18550 (gdhB)
Enzymes [BR:
pcq01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
PcP3B5_18550 (gdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_ACT3
GDH_HM3
GDH_HM1
GDH_HM2
ELFV_dehydrog
PAS_3
Motif
Other DBs
NCBI-ProteinID:
AMO75311
LinkDB
All DBs
Position
1993597..1998462
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AA seq
1621 aa
AA seq
DB search
MAFFTAASKADFQQQLQSALAQHVGEKVLPQVALFAEQFFSLISLDELTQRRLSDLVGCT
LSSWRLLERFDPAEPEVRVYNPDYEKHGWQSTHTAVQVLHPDQPFLVDSVRMELNRRGYS
IHTLQTTVVSVRRNAKGELLEVLPKNSQGKDVRHESLMYLEIDRASHVGELRTLEKTLLE
VLGEVRLAVADFPAMRAKAEELLAWLGKSKAKARAEETAEVRAFLEWLLDNHFTFLGYEE
FTVVDEADGGRVNYDEKSFLGVTKLLRTGLSKEDLHIEDYAVAYLREPLLLSFAKASHPS
RVHRPAYPDYVSIREIDAKGKVLREFRFMGLFTSSVYNESVSQIPSIRGKVAEVERRSGF
DANGHLGKELAQVLEVLPRDDLFQTPVDELFATAMAIVQIQERNKIRLFLRKDPYGRFAY
CLAYVPRDIYSTETRIKIEQVLRERLKASDCEFWTFFSESTLARVQFILRVDPKTRIDID
TKLLEEEAIQACRSWQDDYAALVVENFGEGQGTNILEDFPKGFPAGYRERFAPHFAVVDL
QHLLSLSEARPLVMSFYQPLAQSEQQLHCKLYHADAPLALSDVLPILENLGLRVLGEFPY
RLRHANGREYWIHDFAFTYAEGLDVDIQQLNEILQDAFIHIVNGDAENDAFNRLVLTASL
PWRDVALLRAYARYLKQIRLGFDLGYIASALNAHVDIARELVRLFKTRFYLARKLTAEDL
EDKQQKLEQAILSALDDVQVLNEDRILRRYLDLIKATLRTNFYQPDAAGQNKSYFSFKFN
PRAIPELPKPVPKYEIFVYCPRVEGVHLRGGKVARGGLRWSDREEDYRTEVLGLVKAQQV
KNAVIVPVGAKGGFIPRRLPVGGSRDEIQAEAIACYRIFISGLLDITDNLKEGEVLPPAN
VVRHDEDDPYLVVAADKGTATFSDIANGIAAEYGFWLGDAFASGGSAGYDHKGMGITARG
AWVSVQRHFRERGIDVQKDSVTVIGIGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFLDPN
PDPAVSFAERQRLFNLPRSAWSDYDASLISAGGGVFPRSAKSITLSPEVRARFDIQAERL
TPTELINALLKAPVDLLWNGGIGTYVKSSKESHADVGDKANDALRVDGRELRVKVVGEGG
NLGVTQLGRVEFGLNGGACNTDFIDNAGGVDCSDHEVNIKILLNEVVAAGDMTGKQRNVL
LAEMTEQVGDLVLGNNYKQTQALSLAERRARERIAEYKRLMNDLEARGKLDRALEFLPTD
EALAERIAAGQGLTRAELSVLISYSKIDLKESLLKSLVPDDDYLTRDMETAFPQTLVAKF
GTAMRKHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMTPANVAGAYVIVRDVFHLPH
WFRQIEQLDYQVPAEVQLTLMDELMRLGRRATRWFLRSRRNEQDAARDVAHFGPRIAALG
LKLNELLEGPTRELWQARYQAYVDAGVPELLARMVAGTSHLYTLLPIIEAADVTGRDPAE
VARAYFAIGSELELTWYLQQISNLPVENNWQALAREAFRDDLDWQQRAITVSVLQMQDGP
QDMGERVALWIEQHREMAERWRAMLVELRASTSTDYAMYAVANRELLDLAQSSQHGASVA
A
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcggccagcaaagccgatttccagcagcaactgcaatcggccctg
gcgcagcacgtcggcgaaaaggtgctgccacaagtagccctgttcgccgaacagttcttc
agcctcatctccctcgacgaattgacccagcgccgcctgtccgacctggtcggctgcacc
ctgtcctcctggcgcctgctggagcgcttcgacccggccgagccggaagtgcgcgtgtac
aaccccgactacgagaagcacggctggcagtccacgcacaccgccgtgcaggtgctgcac
ccggaccagccgttcctggtcgactcggtgcgcatggagctgaaccgccgcggctacagc
atccacaccctgcagaccaccgtggtcagcgtgcgccgcaacgccaagggcgagctgctg
gaagtgctgccgaagaacagccagggcaaggacgtgcgccatgagtcgctgatgtacctg
gagatcgaccgcgcctcccatgtcggcgagctgcgcaccctggagaagaccctgctggaa
gtgctgggcgaggtgcgcctggcggtggccgacttcccggccatgcgcgccaaggccgag
gaactgctggcctggctcggcaagtccaaggccaaggcccgcgccgaggagaccgccgag
gtgcgcgccttcctcgaatggctgctggacaaccacttcaccttcctcggctacgaggag
ttcaccgtggtcgacgaggccgacggcggccgggtgaactacgacgagaaatccttcctc
ggcgtgaccaagctgctgcgcaccggcctgagcaaggaagacctgcacatcgaggactac
gcggtggcctacctgcgcgagccgctgctgctgtccttcgccaaggcctcgcaccccagc
cgcgtgcaccgcccggcctacccggactacgtgtccatccgcgagatcgacgccaagggc
aaggtgctgcgcgaattccgcttcatgggcctgttcacctcctcggtgtacaacgagagc
gtcagccagatcccgtcgatccgcggcaaggtcgccgaggtcgagcgccgctccggcttc
gacgccaacggccacctgggcaaggaactggcccaggtgctggaagtgctgccgcgcgac
gacctgttccagacgccggtggacgagctgttcgccaccgccatggccatcgtgcagatc
caggagcgcaacaagatccgcctgttcctgcgcaaggacccatacggccgcttcgcctac
tgcctggcctacgtgccgcgcgacatctattccaccgagacgcggatcaagatcgagcag
gtcctgcgcgagcgcctgaaggccagcgactgcgagttctggaccttcttctccgaatcg
accctggcgcgggtgcagttcatcctgcgggtggacccgaagacgcgcatcgacatcgac
accaagctgctcgaggaagaggccatccaggcctgccgttcctggcaggacgactacgcc
gcgctggtggtggagaacttcggcgaagggcagggcaccaacatcctcgaggacttcccc
aagggcttcccggccggctaccgcgagcgcttcgccccgcacttcgcggtggtcgacctg
cagcacctgctcagcctgtccgaggcccgcccgctggtgatgagcttctaccagccgctg
gcgcagagcgagcagcagctgcactgcaagctgtaccacgccgatgcgccgctggcgctg
tccgacgtgctgccgatcctggagaacctcggcctgcgcgtgctcggcgagttcccctac
cgcctgcgccacgccaacggccgcgagtactggatccacgacttcgccttcacctatgcc
gaaggcctggacgtggacatccagcagctcaacgaaatcctccaggacgccttcatccac
atcgtcaacggcgatgccgagaacgacgccttcaaccgcctggtgctgaccgccagcctg
ccgtggcgcgacgtcgccctgctgcgcgcctacgcccgctacctcaagcagatccgcctg
ggcttcgacctgggctacatcgccagcgcgctgaacgcccacgtggacatcgcccgcgaa
ctggtgcggctgttcaagacgcgcttctacctggcccgcaagctcaccgccgaggacctg
gaagacaagcagcagaagctcgaacaggccatcctcagtgccctggacgacgtccaggtg
ctcaacgaggaccgcatcctgcggcgctacctggacctgatcaaggccaccctgcgcacc
aacttctaccagcccgacgccgccggccagaacaagagctacttcagcttcaagttcaac
cccagggcgatccccgagctgcccaagccggtgcccaagtacgaaatcttcgtctactgc
ccgcgggtggaaggcgtgcacctgcgcggcggcaaggtcgcccgcggcggcctgcgctgg
tccgaccgcgaggaggactaccgcaccgaagtgctcggcctggtcaaggcccagcaggtg
aagaacgcggtgatcgtcccggtcggcgccaagggcggcttcatcccgcggcgcctgccg
gtgggcggcagccgtgacgagatccaggccgaggccatcgcctgctaccgcatcttcatc
tccggcctgctggacatcaccgacaacctcaaggaaggcgaggtgctgccgccggccaac
gtggtgcgccatgacgaggacgacccctacctggtggtggccgccgacaagggcaccgcg
accttctccgacatcgccaacggcatcgccgccgagtacggcttctggctgggcgacgcc
ttcgcctccggcggctcggccggctacgaccacaagggcatgggcatcaccgcccgcggc
gcctgggtctcggtgcagcggcactttcgcgagcgcggcatcgacgtgcagaaggacagc
gtcaccgtcatcggcatcggcgacatggccggcgacgtgttcggcaacggcctgctgatg
tccgacaagctgcagctggtggccgccttcaaccacctgcacatcttcctcgaccccaac
ccggacccggcggtgagcttcgccgagcgccagcgcctgttcaacctgccgcgctcggcc
tggtcggactacgacgcctcgctgatctccgccggcggcggcgtgttcccgcgcagcgcc
aagagcatcaccctgagccccgaggtgcgcgcgcgcttcgacatccaggccgagcgcctg
acccccaccgagctgatcaacgcgctgctcaaggcgccggtggacctgctgtggaacggc
ggcatcggcacctacgtcaagtccagcaaggaaagccacgccgacgtcggcgacaaggcc
aacgacgccctgcgcgtggacggccgcgagctgcgggtgaaggtggtgggcgagggcggc
aacctgggcgtgacccagctgggccgcgtcgagttcggcctcaatggcggcgcctgcaac
accgacttcatcgacaacgccggtggcgtggactgctccgaccacgaggtcaacatcaag
atcctgctcaacgaggtggtggccgccggcgacatgaccggcaagcagcgcaacgtgctg
ctcgccgagatgaccgagcaggtcggcgacctggtgctgggcaacaactacaagcagacc
caggcgctgagcctggccgaacgccgcgcccgcgagcgcatcgccgagtacaagcggctg
atgaacgacctggaggcgcgcggcaagctcgaccgcgccctggagttcctgcccaccgac
gaggccctggccgaacgcatcgccgccggccaggggctgacccgcgccgagctgtcggtg
ctgatctcctacagcaagatcgacctcaaggagtcgctgctcaagtcgctggtgccggat
gacgactacctcacccgcgacatggaaacggccttcccgcagaccctggtggccaagttc
ggcacggccatgcgcaagcaccggctgaagcgcgagatcgtcagcacgcagatcgccaac
gacctggtcaaccacatgggcatcaccttcgtgcagcgcctgaaggagtccaccggcatg
accccggccaacgtcgccggcgcctacgtgatcgtccgcgacgtgttccacctgccgcac
tggttccgccagatcgagcagctcgactaccaggtgccggcggaagtccagctgaccctg
atggacgaactgatgcgcctgggccgccgcgccacccgctggttcctgcgcagccgccgc
aacgagcaggacgccgcccgcgacgtggcccacttcggcccgcgcatcgccgccctgggg
ctgaagctcaacgaactgctcgaaggcccgacccgcgagctgtggcaggcgcgctaccag
gcctacgtcgacgccggcgtgccggaactgctggcgcgcatggtcgccggcaccagccac
ctttacaccctgctgccgatcatcgaggcggcagacgtcaccggccgcgacccggccgaa
gtggcgcgcgcctacttcgccatcggcagcgagctggagctgacctggtacctgcagcag
atcagcaacctgccggtggagaacaactggcaggcgctggcccgcgaagccttccgcgac
gacctcgactggcagcagcgggcgatcaccgtctcggtgctgcagatgcaggacggcccg
caggacatgggcgaacgcgtggcgctgtggatagaacagcaccgcgaaatggccgagcgc
tggcgcgccatgctggtggaactgcgtgcctccaccagcaccgactacgccatgtacgcg
gtggccaaccgcgaactgctggacctggcgcagagcagccagcacggcgcgagcgtcgct
gcctga
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