Pelecanus crispus (Dalmatian pelican): 104023738 Help Entry 104023738         CDS       T08340                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism pcri  Pelecanus crispus (Dalmatian pelican) Pathway pcri04010   MAPK signaling pathway pcri04120   Ubiquitin mediated proteolysis pcri04140   Autophagy - animal pcri04144   Endocytosis pcri04517   IgSF CAM signaling pcri04620   Toll-like receptor signaling pathway pcri04621   NOD-like receptor signaling pathway pcri04622   RIG-I-like receptor signaling pathway pcri05132   Salmonella infection pcri05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pcri00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     104023738 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     104023738 (TRAF6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     104023738 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     104023738 (TRAF6)    04140 Autophagy - animal     104023738 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     104023738 (TRAF6)    04621 NOD-like receptor signaling pathway     104023738 (TRAF6)    04622 RIG-I-like receptor signaling pathway     104023738 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     104023738 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     104023738 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pcri04131]     104023738 (TRAF6)    04121 Ubiquitin system [BR:pcri04121]     104023738 (TRAF6) Enzymes [BR:pcri01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104023738 (TRAF6) Membrane trafficking [BR:pcri04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     104023738 (TRAF6) Ubiquitin system [BR:pcri04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     104023738 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 PspA_IM30 SlyX Med21 Sina_ZnF RING_XB3-XBAT31 TRAF3_RING zf-RING_11 CEP104_ZnF DUF4455 HAP1_N U-box UPF0242 Spc29 DUF1664 DUF16 ATG16 HMMR_N ADIP CENP-F_leu_zip Motif Other DBs NCBI-GeneID:  104023738 NCBI-ProteinID:  XP_009490003 LinkDB All DBs Position Unknown AA seq 545 aa AA seqDB search MSLLYSDNSCGARDLESGCFAAMASACSVGAKEDSVSVSSGTGNPPSSFTEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFCTVECPQCQGAFQKNHLKEHMTQ ECPRRQVRCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPV PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSLQNISVTATNPVPFINGLPFEPAL FSHVSHAAYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARS TDGAM NT seq 1638 nt NT seq  +upstreamnt  +downstreamnt atgagcttgctgtatagtgataacagttgtggagcccgagacttggaaagtggctgcttt gcagccatggccagtgcctgcagcgttggagcaaaagaagacagtgtaagtgtcagcagt gggactggaaaccctccaagttctttcacagaggaaacacaaggatatgatgtggagttt gatccgcccttggaaagtaaatatgaatgtccaatctgtttgatggctcttcgggaagca gtgcagacaccatgtggacaccgcttctgcaaaggctgcattgtcaaatcaataagagat gcaggtcacaaatgtccagtagacaatgaaattctgctcgaaaatcaacttttccctgac aacttcgctaaacgggaaatcctttcattaatggttaaatgtcccaacaagggctgcagt atgaagatggagctgaggcatttagaggaccaccagctgcagtgtgatttttgcactgtg gaatgcccacagtgccaaggagccttccagaagaaccatctgaaagagcacatgacacag gagtgtccgaggcgtcaagtccgttgtccaaactgtgccacttctatggcctatgaagat aaagagcttcatgaccaaacctgcccactcgccaatgtattttgtgaatattgcaacaca gtgctcatcagagagcagatgcctaaccattatgacaatgattgtcccactgccccggtg ccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggcacga catatgcaggagttcactcaggttcacatgagaatgatggctcagagtttgcaaaatatc agtgttactgctacaaatcctgtacccttcatcaatggcctaccctttgagcctgccctc ttctcacacgtgtcacatgccgcatatgattgtaatccagaagttgaaaatttcaaagaa actattcagcagttggaaggtcgtctggtaagacaagatcaccaaatcagagaactcatt gctaaaatggagactcagaacactcacatggcagaactcaaacgtactatccggaatttg gagggaaagattactgaaatggaggcacagcaatgtaatggtatttatatctggaagatt gagaacttcagtggacttcagaaagcccaagaagaagagagacctgttgtgatgcacagt cctggcttctatactggaaagcctggctacaagctgtgtttgcgcctgcatatccaatta ccaaatgctcagcgttgtgctaattttatatctctgtttgtccacactatgcaaggagaa tatgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcaa tcagaaggccctgaaaggcagaatcatgaagaagtaatggaagccaagccagagttacta gccttccagagaccaacaattcaccgtaatccaaaaggttttggttatgtgactttcatg cacctgcaaaccttgaaacaaagaaccttcgtaaaggatgatacccttctggtgcgctgt gaagtcctaacgcgtctagatttaaacagtctccgcagagaaggatttcaagctcgcagt actgatggagctatgtag

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