Pelecanus crispus (Dalmatian pelican): 104037885
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Entry
104037885 CDS
T08340
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
pcri
Pelecanus crispus (Dalmatian pelican)
Pathway
pcri03440
Homologous recombination
pcri03460
Fanconi anemia pathway
pcri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104037885 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
104037885 (BRCA1)
03460 Fanconi anemia pathway
104037885 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcri01009
]
104037885 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcri04121
]
104037885 (BRCA1)
03036 Chromosome and associated proteins [BR:
pcri03036
]
104037885 (BRCA1)
03400 DNA repair and recombination proteins [BR:
pcri03400
]
104037885 (BRCA1)
Enzymes [BR:
pcri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104037885 (BRCA1)
Protein phosphatases and associated proteins [BR:
pcri01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104037885 (BRCA1)
Ubiquitin system [BR:
pcri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104037885 (BRCA1)
Multi subunit type E3
BRCC complex
104037885 (BRCA1)
Chromosome and associated proteins [BR:
pcri03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104037885 (BRCA1)
DNA repair and recombination proteins [BR:
pcri03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104037885 (BRCA1)
BRCA1-A complex
104037885 (BRCA1)
BRCA1-B complex
104037885 (BRCA1)
BRCA1-C complex
104037885 (BRCA1)
BRCA complex
104037885 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
104037885 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
BRCT_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
BRCT_3
zf-Nse
zf-RING_5
zf-RING_6
zf-RING_10
zf-MIZ
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
104037885
NCBI-ProteinID:
XP_009490367
LinkDB
All DBs
Position
Unknown
AA seq
1861 aa
AA seq
DB search
MDFSVVAIGDVQNVLSAMQKNLECPICLDMVAEPVSTKCDHIFCRFCMFKLLSKKKKGVI
QCPLCKTEVTKRSLKENSRFKQLIEGLLETIRAFELDTGVKFLNSHHFPKASTEATAAEF
LCKESSVIQSKGFRNRKKRAEENGQENCTLQEANVDTQLTDTRIKRCPLRNKTQKRDSEK
GIYIELGSDSSEELFKQASNTRLEDKAALQVSSQEKLEKLKSAEKGNEYPCNTQPDKLGA
KETILPDVVGESDFSKEGLGKKSTRSSTEYAKPGQVNMTEYQSSPLNVLAVDLLTEQCDR
IGNASPLRNGDTSFFQNTEEMDAEQTLCNSESKEFDLKDSSESLLDESKEMDDVVQSVEA
VEMHEPENDSFHEKELPLEKLRQPETVHSATLNQVSRKRLKRSIQKVNEWFSKSNKILSS
SSSQDDSAGATDVSGEGDACLSDKDSCISEKTDPMVDSVEIAVVEGNKRWSKQAADSIKD
KIFGKTYKRERKSNLPIILSEIVPTTKKEDVATDEKCLNNSSKDGLKRKRKTTCVLQPED
FIKKKDTEEADGRPQSVNWCLGDAEKKRCDESSAVNERHLSENGEDKTLAEIEEGGGSIW
KKATEKVTGKHCDGELELSNYDQKSTKKRSSAAKRCRHSTRTMCALELVVDRNSASPDPA
EPQIDSYPSSEEPRKADSEQRQVRRSRRLQLLSEEMTKETGKGVVIKGARKYDSDHEGSF
FGDQRNVLVHTSECKDLGEPQGMVSYKPLANLKGGDLEANEIQMSLKNSSGTVETGKSLL
NPTSSYQHSNCSSFAPDAASQEGEIQGSPILLQSPSMTVQTASHPTEKVTESCPTFTQDS
GHDTQNVPGDSRTEKLPVAKNVSELTKEAEDSELDTQYLRNVFRHSKRLSFSLRRTPMKA
CAVEDAASETLKISCADQVENKHSKYLKPENLQEEKTTAESLGKVCEKEKLKTYESDRVS
PATCFVGNTECMHAGERQDVSQVANQGNLTPIRMGTARTEDKNRLQTGAQGNEKTVSTDT
EIESELRQNPIKNNRSQSDQSNTEDHIYKITDLNTVGETCLSSESKQAGKAKVVDSEGPI
LHFQSRSMISPAACQQRPDEFSCEVTGKQSSKRKRKQAKGIEEQATQTASTGMPECLVTE
ALEPLKGDSDFTGLSETPDGLLCSDDTEENTSFSETDRKDRSAVFVKSDNALVKELRNRS
VSSKARSRGIQRSRRKARKLQSSDEESSEDEDLPCFQTLISGKSVSTPLQINKQVMSVVE
SSQSPITLPHNGSHDENNIQKMPEAALSNGCVSPSQESECSVNLFSSQSNMSEESVDGAQ
ELNKTLIQVHTSKQVSNVNESKETFQSCNGRLKRSKTNFRDECQEEPNVGATLGEASGYD
SETSNVEDSCEPFSQGEILTTQQKNAMQNNLKKLQQEMAALEAVLKQHGSQDCEFLPIHR
ELPYSSSEGTLGMEQMRQERGVESTEGNLENHKWSSSKGFSANDFHVMPSDSLNSEIKEL
EKERSPELFLPSSKSCLLKRTALEKGLQCDSVLKNKAPSEKTKPVQEAAQEHSQHQLEAE
NADEQKSGTRLNSASVLSNLSGNVTRSPNSSSSVRLLNPRTAEATNSSVVAQNASKSCAQ
ECKSKRSVCFPVSVLHNAAGKENATSPVVTNRKEMSIVASGLNQSEHLMVQKFARKTRST
LSSHITEGTTHVIMKTDKDLVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILDEENFE
VRGDVINGRNHQGPKRARQSLTEKIFKDFEICCYGPFTDMTTEHLEWMVELCGASVVKQL
HLFTHKTNSTAVVVVQPDAWMENTDYRALQQKKNVAMVTREWVLDSVACYECQEFDAYLV
S
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcggtggttgctattggagatgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcttggatatggtagcagagccagtttcaacaaaatgcgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaaaaaaggtgtgata
cagtgtcctctgtgcaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaacgatccgtgcgtttgagcttgacactggagta
aagtttttaaacagtcatcactttcctaaagcatccacagaagccactgctgctgagttc
ctgtgtaaagaaagttctgtcatccaaagtaagggcttcagaaacaggaaaaaacgtgct
gaagaaaatggacaagaaaactgcaccttgcaggaagctaacgtggatacacagcttaca
gataccaggatcaaaagatgtcccctaagaaacaaaacccagaaacgtgactctgaaaaa
gggatttatatagagttgggctctgattcatctgaggagctttttaaacaggcaagcaat
accaggttagaagacaaagcagcgcttcaggtttcatctcaagaaaagctagaaaaactt
aagagtgctgagaaggggaatgaatatccttgcaatacacagcctgacaagctgggtgct
aaagaaacaattctaccagatgtcgtaggtgaaagtgatttctcgaaggaaggcttgggc
aagaaaagcactcggagcagcactgaatatgccaaacctggccaagtgaatatgactgaa
taccagagttctcctttaaatgttcttgctgtagacctactcacagagcagtgtgacaga
ataggtaatgccagtcccttaaggaatggggacacatctttctttcagaacacagaagaa
atggatgcagagcaaactctttgtaacagtgaaagcaaagagtttgacttaaaagatagc
tcagagagtctgttggatgaaagcaaggaaatggatgatgttgtacaaagtgtggaagct
gtggaaatgcatgaacctgagaatgattcttttcatgaaaaagaacttcctctggagaaa
ctgcgtcagccagagacagttcactctgctaccctgaatcaagtctctaggaagagactg
aagcgaagcattcagaaagtcaatgaatggttttcaaaaagcaacaagattctgtcttcc
agttcttcccaggatgattctgctggagcaactgatgtttcaggtgaaggagatgcatgt
ttgtcagacaaagattcctgtatttcagaaaagactgatcctatggtagattctgtggaa
attgcagtggttgaaggaaacaagagatggtcaaaacaagcagcagatagcatcaaagac
aaaatatttgggaaaacgtacaaaagagagaggaagtcaaatctccctattatcttgagt
gagattgtacctactacaaaaaaggaagatgtggctactgatgagaagtgcttgaataat
tccagcaaagatggactaaaacgaaaaaggaagactacctgtgtcctgcaacctgaggat
ttcatcaagaaaaaagatacagaagaggcagatgggcgtcctcaaagtgttaactggtgc
cttggagatgctgaaaagaaaagatgtgatgaaagttccgctgttaatgagcgtcatctc
tctgagaatggagaggataagacactagcagaaattgaggaaggaggaggatccatatgg
aaaaaagctactgaaaaggtgactggcaagcactgtgatggggagctagaactgagtaac
tacgatcagaaaagcactaaaaaaagaagttctgcagcaaaaagatgcaggcattctact
agaaccatgtgtgctctagagttagtagtggacagaaactctgcttctcctgatccagct
gagccacagattgatagctatccaagcagtgaggaaccaaggaaagctgattctgagcaa
agacaagtcaggcgcagcaggaggcttcagttactttctgaagaaatgacaaaagaaaca
ggaaaaggagtagtaattaagggagcaagaaagtatgacagtgatcatgaaggatctttc
tttggagaccaaaggaatgtgttagttcacacttctgaatgcaaagacctgggtgagccg
cagggtatggtgagttacaagccactcgccaatctgaagggtggtgatctggaagcaaat
gaaatacaaatgagtctaaagaattcatctggcactgtagaaactggaaaaagtctcttg
aatcctacatcttcatatcagcattcaaattgtagttcctttgcacctgatgcagcttct
caagaaggggaaatacaaggtagccccatcctcctacagtccccttcaatgactgtgcag
actgcttcccacccgactgaaaaggtgactgaatcatgtcctacttttacccaggatagt
ggacatgatacacaaaatgttccaggggactccagaactgaaaaattgccagtggctaaa
aatgtttcagaattgaccaaggaagctgaagatagtgagttagacacacagtatctgcga
aatgtatttaggcattcaaaacgcctatcgtttagccttcgtcgtactcccatgaaggca
tgtgcagtagaagatgctgcttctgaaactttaaagatatcatgtgctgatcaggtagaa
aacaagcatagcaaatatttaaaaccagaaaacttgcaagaagagaaaacaactgctgaa
agcttgggtaaagtttgtgagaaagagaagcttaagacctatgaatctgaccgtgttagt
cctgcaacttgctttgttggcaacactgaatgtatgcacgcaggggaacgtcaagatgtt
tcacaggttgcaaatcaagggaatctgacaccaataagaatgggtactgctaggactgaa
gacaaaaacagattgcaaacaggagctcagggaaatgaaaagacagtgtcaactgacaca
gagatagaaagcgagttgagacagaatccaatcaaaaataatagaagccaaagtgatcag
agtaatacagaagaccacatttacaaaataaccgatttaaacacagtcggtgaaacatgc
ctcagttcagaaagcaaacaagcaggaaaggccaaagttgttgacagcgaaggaccaata
ctacattttcagtccagatcgatgatttctcctgcagcttgccagcaaaggcctgatgaa
ttcagctgtgaagtcactggaaaacaaagtagcaaaagaaaaagaaaacaagcaaagggg
attgaagaacaagcaacgcaaactgctagcacagggatgcctgagtgtttagttacagag
gctctagaacctcttaaaggggatagtgattttacaggtttgtctgaaacccctgatggc
ttactgtgctctgatgatactgaagagaacaccagcttttctgaaactgataggaaagac
agatctgccgtgtttgtaaaaagtgacaatgccctggtaaaagaactacgtaatagaagt
gttagttctaaggcaagatctcgaggtattcaaagatctcgaagaaaagcacggaaactg
caatcttcagatgaagaatctagcgaggatgaagatttaccatgttttcagacattaata
tctggcaaatcagtaagcacacctttgcagatcaataaacaagtgatgtctgtggtagag
tcttcacaaagtcccatcacattgcctcacaatggaagtcatgatgagaataatatacag
aaaatgcctgaagctgccctaagtaatgggtgtgtttcaccaagccaggagtcggaatgc
tcagtcaacttattttcttcccagtccaacatgtctgaagaatcagttgatggagcacaa
gagctgaacaaaactttaatacaagttcatacatccaaacaagtgagcaatgtgaatgag
agtaaagaaactttccaaagttgtaatggaaggctgaaaagaagcaaaaccaacttcaga
gatgaatgccaagaagagccaaacgtgggagcaaccctaggtgaagcatctggatatgac
agtgaaacaagtaatgtcgaagattcctgtgaaccattctctcagggtgaaatccttact
acacagcagaagaatgctatgcaaaataacctaaaaaaacttcagcaagaaatggctgca
cttgaagcagtgctaaagcagcatggaagccaggactgtgaatttttacctatccataga
gagctgccatattccagtagtgaaggaacacttggaatggaacaaatgagacaagaaaga
ggggtagagtcaacagaaggaaatcttgaaaatcataaatggagcagttcaaagggattt
tcagccaatgatttccatgttatgccaagtgattctctcaacagtgaaatcaaagagtta
gaaaaagaaaggtctccagaactgttccttccgtcttctaaatcctgtttgttaaagaga
acagctttggagaaaggccttcagtgtgacagtgttctgaagaacaaagctccttctgaa
aagacaaaacctgtacaggaagcagcgcaagaacatagtcagcatcagctggaagcagaa
aacgcagatgagcagaaatctgggaccaggctaaacagtgcatctgtcttatcaaatctc
tctggaaatgtgaccaggagtccaaatagctcttcctctgtaaggctgcttaaccctcga
actgcagaagcaacaaatagttctgttgtagctcagaatgctagtaaaagctgtgctcaa
gaatgtaaatcgaagagaagtgtgtgttttcctgtatctgttctgcacaatgcagccggg
aaagaaaatgctacaagtccagttgtgactaacagaaaagaaatgtcaattgtggcatca
ggtctgaatcaaagtgaacatttgatggtgcagaagtttgcaagaaaaactcggagcact
ttatctagtcacattactgaaggaacaacccatgtcataatgaaaacagataaggatctg
gtgtgtgaacggacactgaagtactttctgggtattgcaggaagaaaatgggtagttagt
tatcagtgggtaattcagtctttcaaagaaggaaggatactggatgaggagaactttgaa
gttagaggagatgtaatcaatgggagaaaccaccaaggtcctaagagggctagacagtct
ctgactgaaaagatctttaaagactttgagatctgttgctatggacctttcactgatatg
actacagaacatctagaatggatggtggagctctgtggtgcctctgtagtgaagcaactt
catctgttcacacacaaaacaaattctactgctgtcgtggttgtgcaaccagatgcgtgg
atggaaaacacagattacagagcactccagcaaaagaagaatgttgccatggtgactcga
gagtgggtattagacagtgttgcttgctatgagtgccaggagttcgatgcttaccttgtg
tcctaa
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integrated database retrieval system
