Pseudorca crassidens (false killer whale): 137212848
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Entry
137212848 CDS
T12027
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pcrs Pseudorca crassidens (false killer whale)
Brite
KEGG Orthology (KO) [BR:
pcrs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcrs04040
]
137212848 (SCN4A)
Ion channels [BR:
pcrs04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137212848 (SCN4A)
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
137212848
NCBI-ProteinID:
XP_067572950
LinkDB
All DBs
Position
19:complement(49966968..50013249)
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AA seq
1814 aa
AA seq
DB search
MATSSLPTVVPLGPESLRPFTRESQAAIERRVMEEEARQQRNKQMEIEEPEQKPCSDLEA
GKSLPLIYGDPPPEVIGIPLEELDPYYSDKKTFIVLNKGKAIFRFSATPALYVLSPFSTL
RRYAIKVLIHSLFSMFIMITILTNCVFMTMSDPPSWSKHVEYTFTGIYTFESLIKILARG
FCIEDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGNDTW
DGQESWAGNSTFDWDAYINDEGNFYFLEGSNDALLCGNSSDAGRCPEGYECIKAGRNPNY
GYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILA
VVAMAYAEQNEATLAENQEKEEEFQQMLEKFKKQQEEAKAAQALEGREADEDPAHGKDCN
GSLDTSAGEKGPPRPSCSAGSGISDAMEELEEAHQKCPPWWYKCSQKVLIWNCCTPWMKF
KNIVHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEQFDRVLNVGNLVFTGIFTAEMVL
KLIAMDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLN
MLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAADCNLPRWHMHDF
FHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLVVLNLFLALLLSSFSA
DSLAASDEDGEMNNLQIAVTRIKWGVGFAKAFLVGLLHGKILSPKVIMLSLGGTGEAGEA
GEAGESVSEDEKKELPPEEDENKDLKKDNHILNHMGLADGPPPSIELDHLNFINNPYLTI
HVPIASEESDLEMPTEEETDTFSEPEDGKKPLQPLDGNSSVCSTADYKPPEEDPEEQAEE
SPEGEQPEECFTEACVQRFPCLYVDISQGRGKMWWTLRRACFKIVEHNWFETFIVFMILL
SSGALAFEDIYIEQRRAIRTVLECADKVFTYIFITEMLLKWVAYGFKVYFTNAWCWLDFL
IVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNV
LLVCLIFWLIFSIMGVNLFAGKFYYCMNTTTSERFDISEVNNKSECESLMHTGQVRWLNV
KVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEVNIYMYLYFVIFIIFGS
FFTLNLFIGVIIDNFNQQKKKFGGKDLFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQ
GMVYDLVTQQAFDITIMILICLNMVTMMVETDDQSQLKVDILYNVNMVFIIIFTGECMLK
MLALRQYYFTIGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRVLRLIR
GAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDMFNFETFG
NSIICLFEITTSAGWDGLLNPILNSGPPDCDPALENPGTSVRGDCGNPSIGICFFCSYII
ISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIDYSRLSDF
VDTLQEPLRLAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALKETMEE
KFMAANPSKVSYEPITTTLKRKHEEVCAVKIQRAYRRHLLQRSVKQASYMYRHSQDSSGD
AAPEKEGLIADTMNKMYGPENGNSGLQSKGEWRGSTWDPRPALGLLSIRPTDTALPPAPP
PGQTVRPGVKESLV
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcatctctgcccacggtggtgcctctgggccctgagagcctgcgccccttc
acccgggagtcccaggcagccatagaacggcgggtgatggaggaggaggcccggcagcag
cggaacaagcagatggagatcgaggagcccgaacagaagccgtgcagtgacctggaggct
ggcaagagcctgcccctcatctatggggaccccccgccggaggtcattggcatccccctg
gaggaactggatccctactacagtgacaagaagaccttcatcgtgctcaacaagggcaag
gccatcttccgcttctccgccacccctgctctctacgtgctgagccccttcagcaccctc
agacgctacgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgcgtgttcatgaccatgagcgacccgccttcctggtctaagcatgtg
gagtacaccttcacggggatctacaccttcgagtccctcatcaagatcctggcccgcggc
ttctgcatcgaagacttcacattcctccgggacccctggaactggctggacttcagcgtc
atcatgatggcgtacctgacggagtttgtggacttgggcaacatctcagccctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacagtcatcccagggctgaagaccatcgtg
ggagccctgatccagtcggtgaaaaagctgtcagatgtgatgatactcaccgtcttctgc
ctgagtgtctttgccctggtggggctgcagctcttcatgggaaacctgcggcagaagtgt
gtgcgctggcccccgcccttcaatgacaccaacaccacgtggtacggcaatgacacctgg
gacggccaggagagctgggccggcaactctacctttgactgggatgcctacatcaatgac
gaagggaacttctatttcctggaaggctccaatgacgccctgctctgtgggaacagcagc
gatgctgggcgctgccctgagggttacgagtgcatcaaggccgggcggaaccccaactat
ggctacaccagctatgacaccttcagctgggccttcctggctctcttccgcctcatgaca
caggactattgggagaacctcttccagctgacccttcgggcagccggcaagacctacatg
atcttcttcgtggtcatcattttcctgggctccttctacctcatcaacctgatcctggcg
gtggtggccatggcatacgctgagcagaacgaggccaccttggccgagaatcaggagaaa
gaagaagagtttcagcagatgctggagaaattcaaaaagcagcaggaagaggccaaggcc
gctcaggcgctggaaggtagggaggcagacgaggacccagcccacggcaaagactgcaac
ggcagcctggacacatcggcgggggagaaggggcccccaagacccagctgcagcgcaggc
agcggcatctcagatgctatggaagagctggaagaggcccaccagaagtgcccaccatgg
tggtacaagtgttcccagaaagtgctcatatggaactgctgcaccccgtggatgaagttc
aagaacatcgtccacttgatcgtcatggaccccttcgtggacctgggcatcaccatctgc
attgtgctcaacaccctcttcatggccatggagcattaccccatgacggagcaatttgac
agagtgctcaacgtgggcaacctggtcttcacgggcatcttcacagcagagatggtgctg
aagctcatcgccatggacccctacgagtacttccagcagggctggaacatcttcgacagt
atcatcgtcaccctcagcctggtggaactgggcctggccaatgtgcaggggctgtcggtg
ctccgctccttccgtctgctgcgggtcttcaagctggccaagtcgtggccaacgctgaac
atgctcatcaagatcatcggcaactcggtgggggcgctgggcaacctgacgctggtgctg
gccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaagagctacaag
gagtgcgtgtgcaagatcgccgcggactgcaacctgccccgctggcacatgcacgacttc
ttccactccttcctcatcgtcttccgcatcctgtgcggggagtggatcgagaccatgtgg
gactgcatggaggtggccggccaggccatgtgcctcaccgtcttcctcatggtcatggtc
atcggcaacctggtggtcctgaacctcttcttggccctgctgctcagctccttcagcgcc
gacagcctggcggcctcggacgaggatggcgagatgaacaacctgcagatcgccgtcacg
cgcatcaagtggggtgtcggcttcgccaaagccttcctcgtggggctgctgcatggcaag
atcctgagccccaaggttatcatgctcagcctcggggggactggggaggctggcgaggcc
ggcgaggctggggaaagtgtctcagaagacgagaagaaggagctaccgcccgaggaggat
gaaaacaaggacctcaagaaggacaatcatatcctgaaccacatgggcctggctgatggc
cctccccccagcattgagctggaccacctcaacttcatcaacaacccctacctgaccatc
cacgtgcccatcgcctccgaggagtctgacctggagatgcccacagaggaggaaacggac
accttctcagagcctgaggatggcaagaagccgctgcagcccctcgacgggaactcctcc
gtctgcagcactgccgactacaagccccccgaggaggaccccgaggaacaggccgaggag
agccctgagggggagcagcctgaggagtgcttcaccgaggcctgtgtgcagcgctttccc
tgcctctacgtggacatctcccagggccgagggaagatgtggtggacgctgcgcagggcc
tgcttcaagatcgttgagcacaactggtttgagaccttcatcgtcttcatgatcctactc
agcagtggagccttggccttcgaggacatctacatcgagcagcggcgggccatccggacc
gtcctggagtgcgccgacaaggtcttcacctacatcttcatcacggagatgctgctcaag
tgggtggcctacggcttcaaggtgtactttaccaacgcctggtgctggctcgacttcctc
atcgtggatgtctccatcatcagcctggtggccaactggctgggctactcggagctggga
cccatcaaatccctgcggacactcagggctctgcgtcccctgagggcactgtctagattc
gagggcatgagggtggtggtgaatgccctcctgggagccatcccctccatcatgaatgtg
ctgctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtcaacctgtttgcc
ggcaagttctactactgcatgaacaccaccacctccgagaggttcgacatctccgaggtc
aacaacaagtccgagtgcgagagcctgatgcacacgggccaggtccgctggctcaacgtc
aaggtcaactacgacaacgtgggtctgggctacctctccctcctgcaggtggccaccttc
aagggctggatggacatcatgtatgcagccgtggactcccgggagaaggaggaacagccc
cagtacgaggtgaacatctacatgtacctctatttcgtcatcttcatcatcttcggctcc
ttcttcaccctcaacctcttcattggcgtcatcattgacaacttcaaccagcagaagaag
aagtttggagggaaagacctcttcatgacggaggaacagaagaaatactataacgccatg
aagaagcttggctccaagaagcctcagaagccaattccccggccccagaacaagatccag
ggcatggtgtacgacctggtgacgcagcaggcgttcgacatcacgattatgatcctcatc
tgcctcaacatggtcaccatgatggtggagacggatgaccagagccagctcaaagtggac
atcctctacaacgtcaacatggtcttcatcatcatcttcacgggcgagtgcatgctcaag
atgttggccctgcgccaatactatttcaccatcggctggaacatcttcgactttgtggtc
gtcatcctgtccattgtgggcctcgcactctctgacctgatccagaaatacttcgtgtca
cccacgctgttccgtgtcatccgcctggcgcggattgggcgcgtcctacggctgatccga
ggggccaagggcatcaggacgctgctctttgctctcatgatgtcactgcccgccctcttc
aacatcggccttctcctcttcctggtcatgttcatctactccatcttcggcatgtccaac
ttcgcttacgtcaagaaggaatcgggcatcgacgacatgtttaactttgagaccttcggc
aacagtatcatctgcctctttgagatcaccacgtcagccggctgggacgggcttctcaac
cccatcctcaacagcgggccccccgactgtgaccccgcgctggagaacccgggcaccagc
gtcaggggcgactgcggcaacccctccatcggcatctgcttcttctgcagctacatcatc
atctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcaacgtg
gccacggaggagagcagtgagcctctcggggaggatgacttcgagatgttctacgagacg
tgggagaagtttgaccctgacgccacgcagttcatcgactacagccgcctctccgacttc
gtggacaccctgcaggagccgctgaggctcgccaagcccaacaagatcaagctcatcaca
ctggacctgcccatggtgccaggggacaagatccactgcctggacatcctctttgccctg
accaaagaggtcctgggagactctggggagatggatgccctcaaggagaccatggaggag
aagttcatggctgccaacccatccaaggtctcctacgagcccatcacaaccaccctcaag
aggaagcacgaggaagtgtgcgccgtcaagatccagagggcctaccgccggcacctgctg
cagcgctccgtgaagcaggcttcctacatgtaccgccacagtcaggacagcagcggggac
gcagcacccgagaaggaggggctgattgctgacaccatgaacaagatgtatggccctgag
aacgggaacagcggtttgcagagcaagggggagtggaggggctcgacatgggaccccaga
cctgccctggggctcctgtccatcagacccacagacacagccctccctcccgccccaccc
ccagggcagacggtgcgcccaggggtcaaagagtctcttgtctag
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integrated database retrieval system
