Penicillium rubens: N7525_007188
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Entry
N7525_007188 CDS
T01091
Name
(RefSeq) uncharacterized protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pcs
Penicillium rubens
Pathway
pcs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
N7525_007188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcs03400
]
N7525_007188
Enzymes [BR:
pcs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
N7525_007188
DNA repair and recombination proteins [BR:
pcs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
N7525_007188
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
RTT107_BRCT_5
LIG3_BRCT
mRNA_cap_enzyme
DUF2529
Motif
Other DBs
NCBI-GeneID:
8314155
NCBI-ProteinID:
XP_061068366
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MDSDEILGQDDVLKPEQEEDLDEKYPNRPHNRAPTLPFHDLYLDLFNPLSELKKKPSGPA
PARRKAGPHGKGATSLNPFERRRDVIERFISRWRKDVGDDIYPALRLILPDKDRDRPMYG
IKEKAIGRMLVKIMKINKESEDGYNLLNWKLPGQGATTRMAGDFAGRCFDVLSKRPMRTD
PGDMTIEEVNEKLDKLSAASKEDEQLPILTEFYRRMNPEELLWLIRIILRQMKVGATERT
FFDVWHPDAENLYSISSSLRRVCWELHDPNIRLEGEERGIALMQCFQPQLAQFQMHSFER
IIARMKPTEDDNVFWIEEKMDGERMQLHMAPDDSTKGGRKFGFWSRKAKEYTYLYGNGIY
DENGALTRHLKDAFVDGVQSIILDGEMITWDPEQDAMVPFGTLKTAALAEQRNPFSNGPR
PLFRVFDILHLNGRDLTKYTLRDRRNALEKTVRPVHRRFEIHSYEEATTTTEVEAALRKV
VAEASEGLVLKNPRSPYRLNERHDDWMKVKPDYMTEFGESLDVIVIGGYYGSGRRGGALS
SFLCGLRVDDSTQAAEKCWSFCKVGGGFTAADYQEVRHHTDGKWKAWDAKKPPTTFVELA
GGDAQHERPDMWIKPSDSIVLCVKAASVAISDQFRMGLTLRFPRFKKLRKDKDWKTALSV
QEFLDLKSNAEQEHREKEFSVDNSRKKRVKRATKKPLTVAGHEDNVDVQYLGPSGHVFDE
LNFFIMTESTVPEKKTKLQLEQLVKANGGKIYQTKTAAVDTLCVAERRTVKVASLQKSGE
QNIIRPSWLIDCVKQNEIDAGLPDLLLPFEPRHMFFMTEEKEEEVAANVDKFMDSYARDT
TVNELKDVFKEMEQNQEQADDVPDPETTQRIETRIQERVNAGYTVPVGWLFRGLKFHFYS
NGNQPDESASREIRREDQRLQFARNTARFAAAEIAKTLKSSGITHVIVDPETVSSADKTS
LRNTLAAKPGAKMPHLVSVGWVEECWKNGTLLDEERFPILR
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggattccgacgagatattagggcaggatgatgtcctgaagccagagcaagaagaagat
ctggacgaaaaataccccaacagacctcacaaccgagccccgacattgccgttccacgat
ctgtacctcgacctattcaatccactgagtgaactcaagaagaagccttcagggcctgcc
ccagctcgccgaaaagctggtccccatggtaaaggtgctacaagtcttaacccgttcgag
cgccggcgcgatgtgattgagcgctttatttcgcggtggcgcaaggatgtcggcgacgac
atttaccccgccctgcgattgattcttcccgacaaagatcgcgatcgacctatgtatggg
atcaaggagaaagctatcggaaggatgctcgtcaagatcatgaagatcaacaaagaatca
gaagatggatacaaccttctgaattggaagcttcctggtcagggtgctacaacacgcatg
gcgggtgactttgctggaagatgttttgacgttctctccaagcggcctatgcggaccgat
ccgggagacatgacgatcgaggaggtcaacgagaagctggataagctatctgctgcctca
aaggaggatgaacaactgccaatattgacggagttctaccggcggatgaatcccgaagaa
cttctgtggctcatccgtattatacttcggcagatgaaggttggtgctaccgagcgaaca
ttctttgatgtttggcacccagatgccgagaatctctacagcatctctagtagtctgcga
cgtgtgtgctgggagctgcatgatcccaatatccggctggagggagaggagcgcggtatt
gcgttgatgcaatgcttccagcctcagctggcccaatttcagatgcattcatttgagaga
atcattgctcgtatgaaaccaaccgaagatgacaacgtgttttggattgaagagaaaatg
gacggtgagcgtatgcaactccacatggcgcccgacgattcaaccaaaggtggtcggaaa
tttggcttctggtcgcgcaaagcgaaagaatacacctatctatatgggaatgggatttat
gacgagaacggtgccctgacaagacatctaaaagatgctttcgtcgatggggtacagagc
attattctcgacggcgagatgataacctgggatcctgaacaggacgccatggttcccttt
ggcacgctcaagaccgcagcgttggcggaacaacgtaatccattctcaaatggtccgcga
cccttgttccgcgtgttcgatatcttacatcttaacggacgtgacctaacaaagtatacc
cttcgtgatcgtcgcaatgccctggagaaaaccgtccgacctgtccaccgccggtttgaa
attcactcttacgaggaagccactaccaccacagaagttgaagcggctcttcggaaggtt
gtcgctgaggcgtcagagggtcttgttttgaagaaccctcgctctccatatcgactgaac
gaacgccacgatgactggatgaaagtcaaaccagactatatgaccgaatttggagagtcc
cttgacgttattgtgattggtggatactatggctcaggtcgtcgaggaggtgcgctctcc
agttttctctgcggattacgagttgacgacagcacgcaagcagcagagaaatgctggtcc
ttttgtaaggtcggtggcgggtttactgcagctgactatcaggaggtgcgccatcataca
gacggcaagtggaaggcatgggacgcgaaaaagccacccactacctttgtcgaactggca
ggcggagacgcccagcatgagcgtccagatatgtggatcaaaccatccgactcaattgtt
ttgtgtgtgaaagcggcatccgtcgcaatcagtgaccaattccgcatgggcttgacattg
cgatttcctcgcttcaagaagttgcggaaggacaaggattggaaaaccgcgctctcagtc
caggagttccttgatctaaaatctaatgcagagcaagaacaccgggagaaagagttctct
gttgataactctcgaaagaagcgagtaaagagggccactaagaagccactcacagttgct
ggtcacgaggataatgtcgatgtccagtatcttggaccttctgggcatgtcttcgatgag
cttaacttctttataatgaccgagtcgaccgtcccagaaaagaaaacaaaacttcaactg
gaacaactcgtgaaggctaatggtggcaagatctatcaaaccaagacagctgcggtagac
acgctctgtgttgccgagcggagaacggtcaaagtagcttcattacaaaagagtggagag
caaaacatcattcgaccatcgtggcttatcgactgcgtcaaacagaatgaaatagatgca
ggcctgccggatcttcttctcccgttcgagccaagacatatgtttttcatgacagaggaa
aaagaggaagaagttgccgcaaatgtcgacaaattcatggacagctatgctcgggataca
actgtcaacgagctaaaggacgtattcaaagaaatggaacaaaaccaagaacaggccgac
gatgtccctgatccagaaacgactcagagaatcgagactcgcatccaggaaagagtaaac
gccggctacacagtacccgttggatggctcttccgaggcttgaagttccacttctactcg
aacgggaaccagccggacgaatcagcctcccgggaaatcagaagggaggaccagcgcctg
cagttcgctcgcaacacagcccggtttgcggctgctgagattgccaagacgttgaagagc
tcaggcatcacacatgtgattgtcgatccagaaactgtgtcttcagcggacaaaacatct
ctccggaatacattggccgcgaagccgggagcgaaaatgccgcatcttgttagcgtgggc
tgggtggaagaatgctggaaaaatggcacgttgctggacgaagaaagattcccgatcttg
cgatga
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integrated database retrieval system
