Psilocybe cubensis (magic mushroom): JR316_0000499
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Entry
JR316_0000499 CDS
T08288
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JR316_0000499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcub03041
]
JR316_0000499
Spliceosome [BR:
pcub03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
JR316_0000499
Complex C
U5 SnRNP specific factors
JR316_0000499
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calreticulin
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
71966820
NCBI-ProteinID:
XP_047754059
LinkDB
All DBs
Position
1:complement(<1647929..>1653936)
Genome browser
AA seq
1511 aa
AA seq
DB search
MASFEDYDEFGNYIGADLDSDDEEDVPQQQFDDEPQQNAPLEGYDDSETNEGDNMALMQV
DEPSHRAVVLHEEKQYYPSAQDVYGPGVETMVQEEDAQPLSEPIIAPVKDRKWTVVEKGM
PETRFDKGFLLDMTRFPEMIRNVAVVGHLHHGKTALMDMLVYETHKLVWDADKPTRYTDT
HILSREREISIKSSPMSLVLSTTAGKSHLIHFIDTPGHINFVDEVASAMRLVDGILLVVD
VVEGLMVGTEFIIRHALQEKVKITLVVNKIDRLILELRIKPADAYYKIKHTIEEINTFIS
SIDPNPDLRLSPENGNVAFASTDMNWCFTLRSFAQMYADTYGSLDIRSFADRLWGDIYFN
EDTRKFTRKQADPESERTFVHFILNPLYKLYSHVLSEETDDLRNTLEGLGIQLKPVMYKM
DVRPLLKAVLDQFFGKATGLVDIIVEHIPSPVEGATGKVESTYLGSHTGELAASMKSCDS
EGPVVVQISKLYHTTDAQSFRSFGRVISGTLRKGMNIKVLGEGYSPEDEEDMMKATVDDL
WISESRYFIPAEEIPAGNLVLIGGVDASISKTATLAGIDIEEELNIFRPIRHMTQSVLKI
AIEPIAPSELPKMLAGLRSINKSYPLVSTKVEESGEHVLIGTGELYLDCVMHDLRRLFSE
IEIKVSDPVTKFCETVLETSALKCYADTPNKKNKLTMIAEPLERGIAEDIERGRVNMRMT
AKERGGFFQEKYQWDLLASRSIWAFGPDENGPNVLLDDTLPSQVDKKLLGTVKEHIKQGF
QWGAREGPLCDEPMRNVKFRILDAGLAQEPIFRGGGQIVPTARRVCYSSFLMATPRLMEP
VYYVEVQAPADCISAVYTVLARRRGHVTQDIPKAGSPLYTVKALIPVIDANGFETDLRTA
TQGQAFCLQVFDHWSIVPGDPTDSSIKLRPLEPASGQALARDLVLKTRRRKGLGDQIAVS
KYLDDEFVVCIVALSLLAIVATGALAQSDDIPKPNFTPTEIKAPFVEQFTEDWSERWTPS
EATKKTPVGGETFSYVGKWEVEDPAISAIEGDKGLVAKSKAAHHAISAPFSSPVDFKDKP
LVVQYEVKYQKGGNCGGGYVKLLEDGFQTSGKEFSDTTPWVVMFGPDLTCPGTKVHFIFR
HKSPKTGVTEEKHLRIAPHPTIEKLTNLYTLIINPDNTYEVLINGESEKKGSLLEDFEPP
VNPPKEIDDAEDFKPADWVDEATIADPDAKKPEDWDEDAPFEIVDEEAIKPEGWLDDEPL
TIPDPDATKPEEWDDEEDGDWIAPTVPNPKCSDAPGCGEWKRPFKSNPAYKGKWSAPQIP
NPAYKGPWAPRKIPNPDYFEDLTPVKSLSKIGGVGIELWTMTEDILFDNIYVGHSAEDAK
AFAAETFEVKKPIEVALDKPVTVDDDEEESISFKEDPVSFIRTRVIAFVEAAKLDPVSAF
KSQPETGAAIVGALFTLFGMLSALVGIIGGAQKPVVTKSTKKTESSDEKKKDAAPVSSAV
DKKDDGLKKRK
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttcgaggattacgatgaatttggaaattatattggcgcggacctagattca
gacgatgaggaggacgtcccccagcaacagttcgacgacgaaccacaacaaaatgcccct
ctggaaggttatgacgacagcgaaacaaatgagggggataacatggcccttatgcaggtt
gacgaaccttcccatagagctgttgtgcttcacgaagagaagcaatactacccttcagcc
caagatgtttacggtcctggagtggaaacaatggttcaggaagaagatgcgcaacctctt
tcggaacccatcatcgcccccgttaaggacaggaaatggactgtagttgagaaaggcatg
cctgagacgcgttttgataaagggtttcttctggacatgacccgcttcccagagatgatt
cgaaacgttgctgttgttggccatcttcaccacggaaaaacagctcttatggatatgcta
gtgtatgaaacgcacaagcttgtttgggatgcagataagcctacccgctacacagacact
catatcttgtcgcgcgagcgtgaaatatcaataaaatcgtctccgatgtctcttgtcctt
tcaacaacagccggaaagtcgcatcttattcattttattgacacacctggtcacatcaac
tttgttgacgaagttgcttccgctatgcgcttggtagacggaattttgttggtggttgat
gtggttgaagggttgatggttgggacagagttcataattcgacatgctctccaagaaaaa
gtcaaaatcactctagttgtgaacaaaattgacagattaattttggaacttcggataaag
ccagctgatgcttattataaaatcaaacacacgattgaagagattaacacctttatcagc
tccattgatccaaatccagacctgaggcttagccctgaaaatggaaacgtagcatttgca
agcactgacatgaactggtgttttacgttgcgctcctttgctcagatgtacgcggacacg
tatggttcgttggacatcaggtcattcgccgatcgactttggggagacatctacttcaac
gaggatacccgcaaatttacgcgaaaacaagctgatccggaaagtgaacgcacttttgtg
catttcattctcaatcctctgtacaagctttatagccatgtactcagcgaggaaacggac
gatttgcgaaacactttagaaggtttaggtatccagttgaagcctgtcatgtataagatg
gacgtcaggcctctgctcaaagctgttcttgatcagttttttggaaaagcaactggcctt
gtggacatcattgtagaacacattccttcacccgtagaaggagccaccggcaaggtcgaa
tcgacctacttgggatcgcatacaggagaacttgctgcatcgatgaagtcttgcgactcc
gagggcccagtcgttgtccagatctcgaaactttaccacactacagatgctcagtcattc
agatcctttggacgtgtaattagcgggacattgcgcaaaggaatgaacatcaaggtacta
ggagagggatactctcctgaagatgaagaagatatgatgaaagctaccgttgatgacctt
tggatcagcgaatcacgttattttattccagcagaagagattcctgccggaaatcttgtc
ctgatcggaggtgtagacgcatccatatccaaaacagcaacgctggccggtattgacatt
gaggaagagctcaacatcttccgccccatcagacacatgacacaatctgttctcaaaatt
gccattgaacccattgcgccgtcagaattaccaaagatgttagccggtctacgaagtatc
aacaaatcctatccgttggtgtccaccaaggttgaagagagcggagaacacgtcctcatc
ggaacaggagagctttatctcgactgcgtgatgcacgaccttcggagattattttcggaa
attgagatcaaggtctcagatcctgtaacaaaattctgcgaaactgttcttgagaccagt
gcactgaaatgttacgccgacactcccaataaaaagaataagctcacaatgatcgccgaa
ccacttgagcgcggaatcgcggaagacattgaaaggggtcgcgttaatatgcgtatgacg
gctaaggaaagaggtggctttttccaagagaagtatcaatgggatcttctggcatctcga
tcaatatgggcatttggtcctgatgagaatgggcccaacgtacttttggatgatactctg
ccatctcaggtagataaaaaacttctgggaacagttaaagagcatatcaaacaaggcttc
caatggggtgctcgtgaaggtccactttgcgatgagcccatgcgaaatgtcaaattccgc
atccttgacgcaggcctagcgcaagagccaattttccgtggtggcggtcaaattgttccc
actgctcgccgtgtttgttattcatctttcctgatggcaacaccgagactgatggaacca
gtgtactacgtggaagtgcaggctcctgcagactgtatatcggctgtgtatacagtgctc
gcccgccgtcgtggtcatgttacacaagacataccaaaagccggatccccgctatatact
gtcaaagcacttattccggtgatagacgctaatggctttgaaacagatcttcggacagcg
acgcaggggcaagccttctgtttacaagtattcgaccattggtcaattgtcccgggtgat
cccacggactcgagtatcaagctcaggccactggaacccgcttcgggacaggcattagcc
agagaccttgtattaaagacccgccgaagaaaaggactcggggaccagattgcagtgtcc
aaatatttggatgatgagtttgtggtatgcatcgtagcgctttctttactggccattgtc
gctactggcgcattggcccagtcggacgacatcccaaaacccaatttcacacccactgaa
atcaaggcccccttcgtcgagcaattcacagaagactggtcagagcgatggacgccgtcg
gaagcgaccaagaagactccagtcggtggcgagaccttcagctacgtcggcaaatgggag
gttgaagaccctgccatttccgccattgagggagacaagggtctcgtcgccaagagcaaa
gcggcccaccacgccatctctgcccccttctcctcgcccgttgacttcaaggacaaaccc
ctcgtggttcaatacgaagtcaaataccagaagggaggcaattgcggaggtggttatgtc
aagctcctggaggatggcttccaaaccagtggaaaggagttctctgacactacgccctgg
gtggtaatgttcggtcccgatcttacttgccctggaaccaaggttcatttcatcttccgt
cacaagagccctaagacgggcgtcaccgaagagaaacaccttcgcatcgcgcctcacccc
actattgagaaactcactaatttgtataccctcatcattaaccccgacaatacctatgag
gttcttatcaacggagagagcgagaagaagggcagtcttcttgaagactttgagccacct
gtcaaccctcccaaagagattgacgatgctgaagatttcaagcctgccgactgggttgac
gaggctaccatcgcggatcccgacgccaagaagccagaagactgggatgaggatgctccc
tttgagattgtcgacgaagaagccattaagcctgaaggatggctcgatgacgagcctttg
actatccctgaccccgacgccaccaagcctgaagagtgggatgatgaagaagatggtgac
tggattgcccccactgttcctaaccctaagtgctctgatgctcctggttgtggggaatgg
aagcgccccttcaagtccaatcccgcttacaagggcaaatggtctgctcctcagatcccc
aaccctgcatacaagggcccttgggctcctcgtaaaattcccaaccccgactacttcgaa
gacctcacccctgttaaatctctttccaagattggcggtgttggtatcgagctctggacg
atgaccgaagacattcttttcgacaacatctatgttggacactcggctgaagatgcaaag
gcttttgcagctgaaactttcgaagtcaagaagccaattgaagtcgctcttgataagcct
gtcaccgtcgacgacgatgaagaagagtcgatctctttcaaggaagaccctgtcagcttc
atccgcacccgtgtcatcgcattcgttgaagctgctaagctcgaccccgtctcggcattc
aagtctcaacctgagactggcgccgctattgtcggtgcccttttcacgctctttggtatg
ctcagtgccttggttggcatcattggcggtgctcagaaacctgtggtcactaagtctacg
aagaaaaccgaatcttccgacgagaagaaaaaagacgctgcccccgtatcatcagcagtt
gacaagaaagatgatggcttgaagaagcgcaaatga
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