Psilocybe cubensis (magic mushroom): JR316_0005080
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Entry
JR316_0005080 CDS
T08288
Name
(RefSeq) ABC transporter domain-containing protein C20G4.01
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pcub
Psilocybe cubensis (magic mushroom)
Pathway
pcub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JR316_0005080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcub03019
]
JR316_0005080
Messenger RNA biogenesis [BR:
pcub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
JR316_0005080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRDP-like
Motif
Other DBs
NCBI-GeneID:
71971401
NCBI-ProteinID:
XP_047750605
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All DBs
Position
4:2664454..2665633
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AA seq
189 aa
AA seq
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MGAAAITGKSTLLQLLAGKKLINTPGAELTIKGQDVFRNSPSGVTFLGTEWAMNPVVRGD
IVVSAFLDSVGGYRHKERRDILLDILDIDLDWHMHQISDDATHIFDGLNNFPTHVAHMRY
GSFVTLPTPYNPNPSLGTSSTSTLYNLALQWLKEDRDYRRELERNGQQITRGARRDQAVP
SDSETFYRK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgctgcaattaccggaaagtctacactgcttcagcttttggcagggaagaaa
ctgatcaacacccccggcgccgagctcacaatcaagggccaagatgtatttagaaactct
ccctcaggtgtaacattcctaggcacagaatgggctatgaaccccgtcgtccgcggcgat
attgtcgtctccgcattcctagactccgttgggggctatagacataaggagaggagggac
attcttcttgatattctcgacatcgacttggattggcacatgcaccagatctcggatgat
gcaacgcatatcttcgatggcttgaataatttccctacacatgtcgctcatatgcgctat
ggatccttcgtaacccttcccacgccttacaatcctaatcccagtctcggaactagctca
acatccacactatataacttggctcttcaatggctcaaggaagacagagactaccgccgg
gaactcgaaaggaatggtcaacagattactcgcggagcacgcagagaccaagcggtccct
tctgattccgaaacgttctacagaaagtga
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