Pseudomonas cucumis: PSH97_13835
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Entry
PSH97_13835 CDS
T09632
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
pcuc
Pseudomonas cucumis
Module
pcuc_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcuc02000
]
PSH97_13835
01504 Antimicrobial resistance genes [BR:
pcuc01504
]
PSH97_13835
Transporters [BR:
pcuc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PSH97_13835
Antimicrobial resistance genes [BR:
pcuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
PSH97_13835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WLG87540
LinkDB
All DBs
Position
complement(3036651..3039842)
Genome browser
AA seq
1063 aa
AA seq
DB search
MNFSQFFISRPIFAAVLSLLILIAGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG
ETVAAPLEQAITGVENMLYMSSQSTADGKITLTITFALGTDLDNAQVQVQNRVTRTEPKL
PEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYALLNIKDELARLGGVGDVQLF
GMGDYSLRVWLDPNKTASRNLTATDVVTAIREQNRQVAAGALGAPPAPNATAFQLSVNTQ
GRLVSEEEFENIIIRSGENGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS
NAIQISNDVRAKMAELKKNFPEGMDFSIVYDPTIFVRGSIEAVVHTLFEALILVVLVVIL
FLQTWRASIIPLVAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RNIGLGLTPVEATKRAMREVTGPIIATALVLCAVFIPAAFISGLTGQFYKQFALTIAIST
VISAFNSLTLSPALAAVLLKSHDAPKDRFSKVLDKIFGGWLFRPFNRFFDKASHGYVGTV
GRVIRSSGIALLVYAGLMVLTFFGFSNTPTGFVPGQDKQYLVAFAQLPDAASLDRTEDVI
KRMSDLALKQPGVDSAVAFPGLSINGFTNSPNAGIVFVTLKPFDERKDPSMSAGAIAGAL
NGQYAGIQEAYMAIFPPPPVQGLGTIGGFRLQIEDRGNLGYDELYKETMNIITKSHSVPE
LAGLFTSYTVNVPQVDAAIDREKAKTHGVAVSDIFDTLQIYLGSLYANDFNRFGRTYQVN
VQAEQQFRLESDQIGQLKVRNNRGEMIPLATFIKVSDTSGPDRVMHYNGFITAEINGAAA
PGYSSGQAEKAIEKLLKDELPNGMTYEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ
YESWSLPLAVILIVPMTLLSAITGVIASGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD
KQEEGLGPLAAVLEACRLRLRPILMTSFAFIMGVVPLVFSSGAGAEMRHAMGVAVFSGML
GVTFFGLLLTPVFYVLIRNFVERGEARKAAKALKLEKPLEAQQ
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttcccaattcttcatttcacggccgatcttcgcagcggtactgtcgctgctg
atcctgatcgccggcgccatctcgctgttccagttaccgatcagcgaatacccggaagtc
gtgccgccgaccgtagtggtccgtgccaacttcccgggcgccaaccctaaagtcatcggt
gaaaccgtggccgctcctttggagcaagccatcaccggcgtcgagaacatgctgtacatg
tcctcgcagtccaccgctgacggcaagatcaccctgaccatcaccttcgccctgggcact
gacctggataacgcgcaggtacaggttcagaaccgcgtgacccgtaccgagcccaaactt
cccgaggaagtgacgcgcatcggtatcaccgtcgacaaggcgtcgcccgacctgaccatg
gttgtgcacttgacctcgccggacaaacgctacgacatgctctacctgtccaactacgcc
ttgctcaatatcaaggatgagctggcgcgtctgggcggtgtcggtgatgtgcagctgttc
ggcatgggcgattactcgctgcgggtgtggctcgatccgaacaagaccgcttcgcgcaac
ctgaccgccaccgatgtggtcaccgcgattcgtgaacagaaccgtcaagtggcggccggt
gccctgggtgctccgcctgcgccgaatgccaccgcgttccagctgtcggtcaacactcaa
ggccgtctggtgtccgaggaagagttcgagaacatcatcattcgctctggcgaaaatggt
gaaatcactcgcctcaaagacattgctcgcgtcgagcttggctctagccagtacgccctg
cgctccttgctgaacaaccagccggcggtggcgatcccgatcttccagcgcccaggctcc
aacgcgatccagatctccaacgacgttcgggcgaaaatggccgagctgaagaagaacttc
ccggaaggcatggacttcagcatcgtctatgacccgacgatcttcgtgcgcggttccatc
gaggcggtggttcacaccctcttcgaagcgctgatcctggttgtgctggtggtgatcctg
ttcctgcaaacctggcgcgcttcgatcatcccgttggtggcggtgccggtttcgctgatc
ggtacgtttgccgtgatgcacctgttcggcttctcgttgaacgcgctgtcgctgttcggg
ctggtattggccatcggtatcgtggtcgacgatgcgattgtggtggtggaaaacgtcgag
cgaaacatcgggctcggactcaccccggtagaagccaccaagcgtgcgatgcgtgaagtg
accggtccgatcatcgcgacggcgctggtgctgtgtgcggtgttcatcccggccgcgttc
atctccggcttgaccggtcagttctacaaacagttcgccctgacgattgcgatttcgacc
gtcatctcggccttcaactcgctgaccttgtcgccagcgctggccgccgtgttgctcaag
agccatgacgcgcctaaagaccgtttctccaaggttctggacaagatcttcggtggctgg
ttgttccgtccgttcaaccgcttctttgacaaggccagccatggttatgtcggcaccgtg
ggccgggttatccgcagcagcggtatcgccctgctggtgtacgccggcctgatggtgttg
acgttcttcggattctccaataccccgaccggtttcgtacccggccaggacaagcaatac
ctggtggccttcgcgcaactgccggatgccgcgagcctggaccgtaccgaagacgtgatc
aagcgcatgtccgacctggccctgaaacagcctggcgtggacagcgccgtggccttcccg
ggtctgtcgatcaacggtttcaccaatagccctaacgccggcatcgtgttcgtgaccctg
aaaccgttcgacgagcgtaaggatccgagcatgtccgccggtgcgattgccggtgcattg
aacggccagtacgccgggattcaggaagcctacatggcgatcttcccgccaccgccagta
caaggcctggggaccattggcggtttccgcctgcagatcgaagaccggggcaacctgggc
tatgacgagctgtacaaagaaaccatgaacatcatcaccaaaagccacagcgtgccggaa
ctggctggcctgttcaccagctacaccgtgaacgtgccgcaggtcgatgccgccatcgac
cgggaaaaagccaagacccacggcgttgctgtcagcgacatcttcgacaccctgcagatc
tatctgggttcgctgtatgccaacgacttcaaccgcttcggtcgcacctatcaggtcaac
gttcaggctgagcaacagttccgtctcgaatcggaccagatcggtcagctgaaagtgcgt
aacaaccgcggcgagatgattccgctggcgaccttcatcaaggtcagcgacacctcgggg
ccggaccgcgtaatgcactacaacggcttcatcaccgcggaaatcaacggtgcggcagcc
cccggctacagctccggccaggccgaaaaagccatcgagaaactgctcaaggatgaactt
ccgaacggcatgacctacgagtggaccgacctgacctaccagcagattctgtccggcaac
accgcgctgttcgtgttccctctctgcgtactgctggcgttcctggtgctcgcggcgcag
tacgaaagctggagcctgccactggcggtgatcctgatcgtaccgatgaccctgctgtcg
gcgattaccggggtgattgcctcgggcggcgataacaacatcttcacccagatcggcttg
atcgtactggtgggcctggcgtgtaagaacgcgattctgatcgtcgagtttgccaaggat
aaacaggaagaaggcctcggcccgctggcagcggtgctggaagcttgccgtctgcgtctg
cggccgatcctgatgacctccttcgcgttcatcatgggtgttgtgcctctggtgttctcc
agcggtgccggtgccgaaatgcgtcatgccatgggtgtggcggtgttctccgggatgctc
ggggtgaccttcttcggtctgttgctgacgccggtgttctacgtactgattcgcaacttt
gtggagcgcggtgaagcgcgcaaagcggccaaggcgctgaaattggaaaagccactggag
gcgcaacaatga
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