Pseudomonas cucumis: PSH97_22035
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Entry
PSH97_22035 CDS
T09632
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc01501
beta-Lactam resistance
pcuc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSH97_22035
01503 Cationic antimicrobial peptide (CAMP) resistance
PSH97_22035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcuc03036
]
PSH97_22035
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcuc02000
]
PSH97_22035
01504 Antimicrobial resistance genes [BR:
pcuc01504
]
PSH97_22035
Chromosome and associated proteins [BR:
pcuc03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PSH97_22035
Transporters [BR:
pcuc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PSH97_22035
Antimicrobial resistance genes [BR:
pcuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PSH97_22035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
HH_MFP_RND
Beta-barrel_RND
BSH_CzcB
YknX_C
Biotin_lipoyl
BSH_YknX
RND-MFP_C
BSH_CusB
BSH_LcnD
HH_EMRA
RnfC_N
CzcB_C
BMFP
Beta-barrel_YknX
Beta-barrel_AprE
SPATA6
Motif
Other DBs
NCBI-ProteinID:
WLG83754
UniProt:
A0ABY9ETI9
LinkDB
All DBs
Position
4861372..4862520
Genome browser
AA seq
382 aa
AA seq
DB search
MLRRRMLIMLGVVLLIVLVLAGYKAFSIYTMMQGFSAPKPPISVAVATATERPWQSRLPT
VGTLTALQGVDLSLEIAGTVKEVQFESGQKVKAGQPILQLDTSVETALLATAQADLGLAQ
LDYGRGSQLVGSQAISKGEFDRLSAVLQKSRATVNQLKAALERKRILAPFSGTIGIRQVD
VGDYVASGTMIATLQDLSSLYVDFFVPEQAVPKIALGQPVQVIVSAYPTEHFPGTISAIN
PKVENSTRNVMVRATLANPDGKLLPGMFASLQVLLPDPQPRIVVPESAITYTLYGNSLYV
VAQKKAEDGSLEKDDKGEPILIAERRFIETGERRDGMVMITKGVQKGEKVVTAGQIKLDH
GAHIAISDDKTLAEKSSQPRAD
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtcgccgcatgctgatcatgttgggtgttgttctgctgatcgtgctggttctg
gccggttacaaagccttctctatctacacgatgatgcaaggcttctccgcgccgaaacct
ccgataagtgtcgccgtggccaccgccaccgaacgtccgtggcaaagccgtttgccaacg
gtcggcaccctcacggcgctgcaaggggtcgacctgagcctggagatcgccggcaccgtc
aaggaggtgcagttcgagtcaggacagaaggtcaaggccggtcagccgatcctgcaactc
gacacctccgttgaaaccgccctgctggcaaccgctcaagccgacctgggactggcgcaa
ctggattacggtcgcggcagccaattggtgggcagccaggctatttccaaaggcgagttc
gaccgactctcggcggtgttgcaaaagagccgggccacggtcaatcaactcaaggcagcg
ctggagagaaaacgcatcctcgccccgttcagcgggaccatcggcattcgtcaggtagac
gtcggcgactacgtggccagcggcacgatgatcgccaccctgcaagacctcagcagcctc
tacgtcgacttctttgtgcccgagcaggccgtgccgaaaatcgcccttggccaaccggta
caggtcattgtctcggcctacccgacagagcacttccccggcaccatcagcgcaatcaac
ccgaaagtcgagaacagcacccgcaacgtgatggtacgcgccaccctggccaaccccgat
ggcaagttgctgccggggatgttcgccagcctgcaggtgctgttgcccgatccgcagcca
cgcatcgtcgtgccggaaagcgcgatcacctacaccctttatggcaactcgctctacgtc
gtcgcgcagaaaaaagccgaagacggcagtctcgaaaaagacgacaagggcgagccgatt
ctgatcgccgaacggcgcttcatcgaaaccggcgagcgccgcgacgggatggtcatgatc
accaaaggcgtgcagaagggcgaaaaagtggtcacagccggccagatcaaactggaccac
ggcgcgcacattgccatcagcgacgacaagaccctagccgagaagagcagtcagccgcgc
gctgactga
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