Pseudomonas cucumis: PSH97_22040
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Entry
PSH97_22040 CDS
T09632
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcuc
Pseudomonas cucumis
Pathway
pcuc01501
beta-Lactam resistance
pcuc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcuc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSH97_22040
01503 Cationic antimicrobial peptide (CAMP) resistance
PSH97_22040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcuc02000
]
PSH97_22040
01504 Antimicrobial resistance genes [BR:
pcuc01504
]
PSH97_22040
Transporters [BR:
pcuc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PSH97_22040
Antimicrobial resistance genes [BR:
pcuc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PSH97_22040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF1829
DUF498
Motif
Other DBs
NCBI-ProteinID:
WLG83755
LinkDB
All DBs
Position
4862534..4865572
Genome browser
AA seq
1012 aa
AA seq
DB search
MAFTDPFIRRPVLATVVSLLIVLLGFQAWSKLPLRQYPQMENALITVTTSYPGANAETIQ
GYITQPMQQSLASAEGIDYMTSVSRQNFSVISIYARVGSNSDRLFTELLAKANEVKNQLP
QDAEDPVLSKEAADASALMYISFFSDELSNPQITDYLSRVIQPKLATLPGMAEAEILGNQ
VFAMRLWLDPVKLAGFGLSASDVTNAVRQYNFLSAAGEVKGEYVVTSINANTELKSAEAF
GAIPLKVEGDSRVLLRDVARVEMGAENYNTISSFGGTPSVYIGIKATPGANPLDVIKEVR
KIMPDLEAQLPPNLKGEIAYDATLFIQASIDEVVKTLFEAVLIVIVVVFLFLGALRSVVI
PVVTIPLSMIGVMFFMQMMGYSINLLTLLAMVLAIGLVVDDAIVVVENIHRHIEEGKTPL
DAAIEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFKEFALTLAGAVVISGVVALTL
SPMMCAMLLRHDENPTGLAHRLDVIFEGLKRRYQSLLHGTLNTRPVVLVFAVIVLCLIPV
LLKFTQSELAPDEDQGVIFMMANAPQPTNLDYLNTYTDEFLAIFKEFPEYYSSFQINGFN
GVQSGIGGFLLKPWNERSRTQMQILPEVQGKLASISGLQIFGFNLPSLPGTGEGLPFQFV
INSANSYESLLEVMDRVKKRAMESGKFAFVDVDLAFDKPEVVVDIDRAKAAQMGVSMQDL
GGTLATLLGEAEINRFTIEGRSYKVIAQVERPFRDNPDWLNHYYVKNTKGELLPLSTLIT
VTDRARPRQLNQFQQLNSAILSGVPLVSMGEALDTVRQIAREEAPAGYAVDYAGASRQYV
QEGSALWVTFALALAIIFLVLAAQFESFRDPLVILVTVPLSICGALIPLFLGWSSMNIYT
QVGLVTLIGLISKHGILIVQFANQLRKEKGLSPREAVEEAAAIRLRPVLMTTAAMVFGMV
PLIIATGAGAVSRFDIGTVIATGMSIGTLFTLFVLPCIYTLLAKPYKPEEHP
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaccgacccgttcatccgccgcccggtgctcgccaccgtggtcagcctgttg
attgtgctgctgggcttccaggcctggagcaagttgccgctgcgccaatacccgcaaatg
gaaaacgccctgatcacggtgaccacctcttaccccggggccaacgccgaaaccatccag
ggctacatcacccaaccaatgcagcagagcctagccagtgccgagggcatcgactacatg
acctcggtcagtcgccagaacttctcggtgatctcgatttacgcgcgcgtcggttccaac
agcgaccgcttgttcaccgaactgctggccaaggccaacgaggtcaagaaccagctgccc
caggacgccgaagacccggtgctgagcaaggaagccgcagacgcctcggcgctgatgtac
atcagtttcttcagcgacgagctgagcaatccgcagatcaccgactacctgtcccgggtc
atccagccgaaactggcgaccctgccgggcatggccgaagccgagattcttggcaatcag
gtgttcgccatgcgcctgtggctggacccggtgaaactcgccggtttcggcctcagcgcc
agcgatgtgaccaacgccgtgcgccagtacaacttcctctccgccgccggcgaagtgaaa
ggcgagtacgtggtcaccagcatcaacgccaacaccgaactcaaatccgccgaggccttt
ggcgcgatcccgctcaaggtcgagggcgacagtcgcgtgctgctgcgggacgtggcgcgg
gtcgagatgggcgcggagaactacaacaccatcagctctttcggcggcacgccctcggtg
tacatcggtatcaaggccacgcccggcgccaacccgctggacgtgatcaaggaggtgcgc
aagatcatgccggacctggaagcccagctgcctccgaacctgaaaggtgaaatcgcctac
gacgctacgctgttcatccaggcctccatcgacgaagtggtgaaaaccctgttcgaagcg
gtgctgatcgtgatcgtggtggtgttcctgtttctcggtgccctgcgctcggtggtgatc
ccggtggtcaccattccgctgtcgatgatcggcgtaatgttcttcatgcagatgatgggc
tactcgatcaacctgctgaccttgctggcgatggtattggccatcgggctggtggtggac
gacgccatcgtggtggtggaaaacatccaccggcacatcgaagaaggcaagacaccgctg
gatgcggccatcgagggtgcccgggaaatcgccatgccggtggtgtcgatgaccattacc
ctggcggcggtctatgcgccgatcggtttcctgaccggtctgacgggggcgctgttcaag
gagttcgccctgacgctggcgggggcggtggtgatctccggtgtcgtcgccctgacgctg
tcgccgatgatgtgcgccatgctgctgcgccacgatgaaaaccctaccggcctggcccat
cgcctggacgtgatcttcgaaggcctcaagcgccgctaccagagtctgcttcatggcacc
ctcaacacccggccggtggtgctggtgttcgcggtgatcgtgctctgcctgattccggtg
ctgctcaaattcacccagtcggaactggcgccggacgaagaccagggcgtcatcttcatg
atggccaatgccccgcaaccgaccaacctcgactacctgaacacctacaccgacgagttc
ctcgcgattttcaaggagttccccgagtactactcctcgttccagatcaacggcttcaac
ggcgtgcaatcggggatcggcggcttcctgctcaaaccctggaacgaacgcagccgaacc
caaatgcagatcctgcccgaggtccagggcaaactggcaagcatttcgggtttgcagatc
ttcggcttcaatctgccttccctgccgggcacgggtgaaggcttgccgtttcaattcgtg
atcaactcggccaacagctatgaatcattgctggaagtgatggaccgggtgaaaaaaaga
gcaatggaatccggcaagttcgcttttgtcgacgtcgacctggccttcgacaaacccgaa
gtcgtggtggatatcgatcgcgccaaggccgcgcagatgggtgtgtcgatgcaggatctg
ggcggcaccctggcgacgttgctgggtgaggcggagatcaaccgtttcaccatcgaaggc
cgcagctacaaagtcattgctcaggtggaacggcccttccgggataaccccgactggctg
aaccattattacgtgaagaacaccaaaggcgaattgctgcccctgtcgaccctgatcacc
gtgacggaccgggcgcgaccgcgtcagttgaaccagttccagcaactcaactcggcgatt
ctttccggggtgccgctggtcagcatgggtgaagccctcgacacggtgcgccagatcgct
cgggaagaagcgccggcgggttatgccgtcgactatgccggtgcatcacggcaatacgtt
caggaaggcagcgcgctgtgggtcacctttgccctggcgctggcgatcatctttctggtg
ctggcggcccagttcgaaagcttccgcgatccgctggtgattctggtgaccgtgccgctg
tcgatctgtggcgcgctgatcccgctgttccttggctggtcgagcatgaacatctatacc
caagtgggattggtgacgttgatcgggctaatcagcaagcacgggattctgatcgttcag
ttcgccaaccagttacgcaaggagaaggggctgtcgcctcgcgaagcagtggaggaagcg
gcggccattcgcctgcgtccggtattgatgaccacggcggcgatggtattcggcatggtg
ccgttgatcatcgccacgggcgcgggtgccgtcagccggttcgatatcggcacggtgatc
gcgacggggatgtcgatcgggacgctgtttacgttgttcgtgttgccgtgcatctacacg
ttgctggccaagccctataaacctgaagaacacccataa
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