Pseudomonas cucumis: PSH97_26080 Help Entry PSH97_26080       CDS       T09632                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pcuc  Pseudomonas cucumis Pathway pcuc03030   DNA replication pcuc03410   Base excision repair pcuc03420   Nucleotide excision repair pcuc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pcuc00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     PSH97_26080 (ligB)    03410 Base excision repair     PSH97_26080 (ligB)    03420 Nucleotide excision repair     PSH97_26080 (ligB)    03430 Mismatch repair     PSH97_26080 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pcuc03032]     PSH97_26080 (ligB)    03400 DNA repair and recombination proteins [BR:pcuc03400]     PSH97_26080 (ligB) Enzymes [BR:pcuc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      PSH97_26080 (ligB) DNA replication proteins [BR:pcuc03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      PSH97_26080 (ligB) DNA repair and recombination proteins [BR:pcuc03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      PSH97_26080 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      PSH97_26080 (ligB)    MMR (mismatch excision repair)     DNA ligase      PSH97_26080 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       PSH97_26080 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 RNA_ligase HHH_5 Motif Other DBs NCBI-ProteinID:  WLG84502 UniProt:  A0ABY9EUY4 LinkDB All DBs Position 5742157..5743836 Genome browser AA seq 559 aa AA seqDB search MLPNLRLFFGSLLTFACLTANAAECPDWPPARAQKEITTLQQQIDRWDDSYHREGQSLIA DELYDQSRARLTEWRECFDSGASAEPLRTAGGTVAHPIAHTGLEKLRDGRAVEAWLKDRG EVWIQPKVDGVAVTLIYRNGRLHRAISRGDGVNGQDWTASARQIAAIPQKLPRSMDLLLQ GELYWRLTEHVQAQAGSLNARATVAGLMARKALSAEQAAGIGLFVWDWPQGPKNLPARVA ALDELGFPSTAPYSQPIEAFADAERWRDHWYRSPLPFATDGVVLRQDQRPPAERWQAKTP YWSVAWKYPFAQALAEVRKVHFKIGRTGRITPVLDLVPVTLDDRQIKRVSVSSLQRWEAL DIRPGDQVAISLAGLTIPRLDGVVLRSTERQELNAPRAADFHSLSCWQPTPGCESQFLAR LSWLSGKQGLALPHVGPGTWEKLLKAERLGSLVDWMTLDEQELAKIDGFGERSSARLLNS FNSARQRPFARWLKALGLPPTGQARLADSWPALAQRNTEQWQAEAGIGPGRAAQLSAFFR DPQVLALSETLRVAGIDGF NT seq 1680 nt NT seq  +upstreamnt  +downstreamnt atgctgcccaacctgcgcctgtttttcggatccctgctgacctttgcctgcctgaccgcc aatgccgccgaatgccccgactggccgcccgcccgagcacagaaagaaatcaccaccctg caacagcaaatcgatcgctgggacgacagctaccaccgtgaaggccagtcgctgattgcc gacgaactctacgatcagtcccgtgcgcgactgaccgaatggcgtgaatgttttgattca ggcgcctctgccgaaccgttgcgcacggccggcggcacggttgctcaccccatcgcccac actggcctggaaaagctgcgcgatgggcgcgccgtcgaagcctggctaaaagatcggggc gaagtctggattcagcccaaggtcgacggtgtggcggtgacgttgatctatcgcaacggc cggttacaccgggcgatcagtcggggggacggggtaaacggccaggactggaccgcctcg gcgcgccagatcgccgccatccctcaaaagcttccgcggtcgatggacttgctgctgcaa ggcgaactctattggcgcctgaccgaacacgtacaagcccaggccggcagcctcaatgcc cgtgccacagtggccgggctgatggcacgcaaggcgctgagcgccgagcaagccgccggt atcggattgtttgtctgggactggccacaaggtccgaaaaacctgccagcccgcgtagcg gctctggatgaattggggttcccgagcacggcaccctacagtcagccgatcgaggcattt gccgatgccgaacgctggcgcgatcactggtatcgctcgcccctgccctttgccaccgat ggggtcgtgctgcgacaggaccaacgcccaccggccgagcgctggcaggcgaaaacgcct tactggagcgtcgcctggaaataccctttcgcccaggcgctggccgaggtgcgcaaggtc catttcaagatcggacgaaccggccggatcaccccggtgctggatctggtaccggtgacg ctcgatgaccggcagatcaagcgtgtgagtgtcagctccctgcaacgctgggaagcgctg gatattcgcccgggcgatcaggtcgctatcagcctggcggggctgaccatccccagactc gatggtgtcgtattgcgcagcaccgaacgccaggaattgaatgcaccgcgggcagcagac tttcattccttaagctgctggcaaccaacacccggctgcgaaagccaattcctcgcacgc ctgagctggctcagcggcaaacaggggctggccttgcctcatgtcggaccaggcacctgg gagaaactgctcaaggccgaacgcctcggcagcttggtcgattggatgaccctcgatgag caagagcttgctaagattgacggcttcggcgagcgcagcagtgctcgtcttttgaacagc ttcaacagtgcccggcaacgcccattcgctcgctggctcaaagccttggggttgccgcca accggccaggcacgcctcgccgactcctggccggcgctggcccaacgaaacaccgaacaa tggcaggcggaagccggcatcggcccggggcgcgcagcgcaattgagcgcatttttccgc gacccgcaggtcctggccttgagtgagacattacgtgttgccgggattgacggtttctag

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