Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138718514
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Entry
138718514 CDS
T11607
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur04115
p53 signaling pathway
pcur04210
Apoptosis
pcur05164
Influenza A
pcur05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
138718514 (APAF1)
04115 p53 signaling pathway
138718514 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
138718514 (APAF1)
05168 Herpes simplex virus 1 infection
138718514 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
APAF1_C
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WHD_APAF1
NB-ARC
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
CARD
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
DSE1_N
CFAP251_N
NBCH_WD40
Beta-prop_WDR41
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
eIF2A
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
CARD_2
ASA1
WD40_RFWD3
WD40_like
Beta-prop_NUP159_NUP214
Ge1_WD40
PEP5_VPS11_N
Beta-prop_DCAF4
TRM82_WD
Beta-prop_DCAF12
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
Beta-prop_RSE1_2nd
WDR54
AAA_16
AAA_22
nSTAND6
PAC11
WHD_Dark
LRRC37
Motif
Other DBs
NCBI-GeneID:
138718514
NCBI-ProteinID:
XP_069709127
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Position
1:complement(37703840..37735323)
Genome browser
AA seq
1249 aa
AA seq
DB search
MDVKSRNYLLMNRQALEKDIKTSYIMDHMISDEVLTLQEEEKVRQQSTQRERAAMLINII
LTKDNNSYRSFYNALLHEGYRDLAALLQDGIPAISSRNGKSSVDGMTSFVKTVLCEGGVP
QRPVVFVTRPKLVDAIKQKLRCLGSDPGWITVYGMAGCGKTVLTAEALRDHQLLEDYFPG
GVHWISVGKQDKAGLLIKLQNLCSRLEHDSTLSQRPPLNVEEAKDRLRLLMLRKYPRSLL
ILDDIWDSWVLKAFDNQCQVLITSRDRSVTDAVAGNKYEVRVESGLAHEKGLEILSLFVN
MKISELPEQANCLVRECKGSPLVISLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEQLNDNYKDYYKDLSVLPKDVRVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRNQLQELHKNIVNQYKKYYKLNTPVPSQEDC
MYWYNFIAYHMAGANMQKELRDLMFSLDWIRAKTELVGPAHLIHEYVEYSTILDQKDSTV
RENFQEFLSLNGHLLGRQPFPDIIQLGLCQPETSEVYQQAKLHAQRETGAFYLEWINKKS
LKNLYRLVVRPHRDAVYHACFSKDRQRIASCGADKTLQVFKAESGERLLEISAHDDEILC
CAFSADGEFVATCSADKKVKIWNSRTGQCRCVYEEHTEQVNCCQFNNRSGQYLLATCSND
TFIKLWDLNKKYCRNTMMGHVNSVNHCRFSPNDEYVASCSTDGTVKLWEARSGNELKNIE
VKDFFRNADEQPDDVEVLVKCCSWSRNGDMILVVAKNKLLLFDVETCDLLTQVIVSHHST
IQYCDFCPGDELVAVALSHCSVELWNIKSLSKVAYCRGHMSWVHCVTFSPDGSLFLTSSD
DQTIRIWETKKVCKSSDVVLKSELDVVFHNGEVMILAIYNQKDLQLINGNTDSVIIQAAA
QESPISCCCLSEDLKFAAFGQESGTIKVLQLLDGKVLNSQEAYRTSVQHCRFTSDCQTLI
SSAHDSVIQVWNWQLSECLFLRGHKEAIKDFRLLENSKLLSWSFDGTVKVWNITTENMEK
DFACHGGAVLSCAVSPDGTKFSSTSADKTAKIWSFESSSVLHVLEDHEACVRCCTFSPND
KLLATGDDKGEIRIWNVLTGALLHFCSPVTLDEGEPTHGGWVTDLAFSPDSKMLVSSGGY
LKWWDVTTGESLQTFYTNGTNLKSIHVSPNFKVYVTVDNLGILYVLQKL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaagagtagaaactatttacttatgaatcgccaagcactggaaaaggacatc
aagacctcttatattatggatcatatgatttctgacgaagtactaacattacaggaggag
gagaaagtgagacaacagagtacacagagggagcgagcagctatgctaataaacattatc
cttacaaaggataataattcgtacagatccttttataatgcactacttcatgaagggtac
agagatcttgctgcgcttcttcaggacggcatacctgccatctcctccagaaatgggaag
agttcagtggatggaatgacttcatttgttaagacagttctctgcgaaggaggtgtgcca
cagagaccagttgtgtttgtcactcgaccaaaactggtagatgctattaagcagaaactg
cgctgcttggggagcgatccaggctggatcacagtttatggaatggcgggttgtgggaag
actgttttaacagcagaagctttgagggatcatcagcttttggaagattactttccagga
ggagttcactggatctctgttggaaaacaggacaaagcagggctcctgataaaacttcag
aatctctgtagtagattagaacatgactctactctttcacaaagaccaccacttaacgtt
gaggaggctaaagatcgtcttcgtttgctgatgctgcgcaaatatcccagatctcttttg
atcctggatgacatttgggattcctgggtattaaaagcatttgataatcaatgtcaggtt
cttatcaccagtagagacagaagcgtaacagatgccgtagctggcaataaatatgaggtt
cgtgtggaaagtggactagcacatgagaaaggattggagattttatccctatttgtgaat
atgaaaatatcagaactgccagaacaagctaactgccttgtaagagaatgcaaaggttct
cctcttgtgatatccttgataggcgcattgttacgagacttccctaatcgctgggaatac
tatctcagacagttgcaaaataagcagtttaaaagaataagaaaatcttcttcttatgat
tatgaagcccttgatgaagcaatgtctataagtgttgagcaactgaatgacaattataaa
gactactataaagacctttctgtcctcccaaaagatgttagagtacctactaaggttctc
tgtattctttgggatatggaaactgaagaagttgaggatatactacaggaatttgttaac
aaatcactgttgttctgtgatcgtaatgggaagtcatttcattattatttacatgatctc
cagcttgactttcttacagagaagaatcgcaaccagcttcaggagctacataaaaatata
gtaaatcagtacaagaagtattacaaacttaatacacctgttccctctcaagaggattgc
atgtactggtataactttatagcatatcacatggctggtgccaacatgcagaaggaactc
cgtgatcttatgttttctctagattggattagagctaaaacagaattggtagggcctgct
catctgattcatgaatatgtagaatatagtacaatcctggatcaaaaggatagcacagta
cgtgaaaacttccaggaatttctgtctttaaatgggcaccttcttggacggcaaccattt
cctgacattatacagctgggtctttgccagccagagacatcagaggtttatcaacaagcc
aagctacatgctcaaagagaaacaggagcattttatttggaatggataaataaaaaatcc
ttgaaaaacctctaccgtctggtggttcgtccacatagagatgcagtttaccatgcctgc
ttttctaaggacagacaaaggatagcatcatgtggagctgataaaacacttcaggtgttt
aaagcagaaagtggagagagactcctggagataagtgcccatgatgatgaaatactgtgt
tgcgctttctctgcagatggtgaatttgtagcaacttgttcagctgataaaaaagtgaag
atctggaattcaagaacaggccagtgtaggtgtgtatatgaagaacacacagagcaggtc
aattgctgccagttcaataacagaagtggtcagtatcttttagccacctgctcaaatgac
actttcatcaaactttgggatttgaacaaaaagtattgtagaaacacgatgatgggtcat
gtaaattctgtcaatcactgtagattttcaccaaatgatgagtatgttgctagctgctca
acagatggaacagtaaagctttgggaagcacgctcaggaaatgaactgaaaaatattgag
gtaaaagacttcttcagaaatgctgatgaacaaccagatgatgtggaggttttagtaaaa
tgttgttcttggtccagaaatggtgacatgattctggtggtagccaaaaataagcttttg
ctttttgatgttgaaacgtgtgatttgttaacacaagtcatcgtaagtcatcacagtaca
atccaatactgtgacttttgtcctggtgatgagttagtagcagttgctttgtctcattgt
tctgttgagttatggaatattaagtctttatcaaaagtagcatattgcaggggacacatg
agctgggttcactgtgtgacattttcgccagatggatctctgtttctgacatcatctgat
gaccaaacaatacgtatttgggaaacaaagaaggtgtgcaagtcctctgatgttgtgctg
aaaagtgaactagatgttgtatttcacaatggtgaagtgatgattttagcaatttataat
cagaaggatttacagcttatcaatggaaatacagacagtgttattatacaggcagcagct
caagaatcccccatttcctgctgttgcttaagtgaagatcttaaatttgcagcttttgga
caagagagtggaacaataaaggtattacagttgctggatgggaaagttctgaattcccag
gaggcctacaggacatccgtgcagcattgtcgatttacctctgattgtcaaactctcatt
tcaagcgctcatgattcagttatacaggtgtggaattggcagttgagtgaatgtctgttt
ctaagagggcacaaggaagcaatcaaggattttagacttctggaaaattcaaaacttctt
tcttggtcatttgatggaactgttaaggtttggaatatcactacagaaaacatggaaaaa
gattttgcttgccatggaggtgctgttctttcctgtgctgtttcacctgatggtactaag
ttttcatctacttctgctgacaaaactgcaaagatatggagctttgaaagctcatctgtt
cttcatgtgctggaagatcatgaagcctgtgtccggtgctgtaccttctctcctaatgac
aaattattggcaactggagatgacaaaggagaaataaggatttggaacgttttaacaggt
gcattacttcacttctgctccccagttactctagatgaaggagaaccaacgcatggtggt
tgggtaacagacctcgcattctctcctgacagtaaaatgcttgtgtcatctggaggttat
cttaaatggtgggatgtaactactggagaatccttacaaaccttctacacaaatggaacg
aacctcaagtcaatacacgtgtcccctaatttcaaagtgtatgtgactgttgataatctt
ggtattctttatgtattacagaagttgtga
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integrated database retrieval system
