KEGG   Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138723925
Entry
138723925         CDS       T11607                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pcur  Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcur00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138723925 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcur03041]
    138723925 (SMNDC1)
Spliceosome [BR:pcur03041]
 Complex A
  U2 snRNP components
   U2 related factors
    138723925 (SMNDC1)
 Complex B
    138723925 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    138723925 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 138723925
NCBI-ProteinID: XP_069719533
LinkDB
Position
9:complement(6023218..6034067)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNAENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSSASALPSHSWKVGDRCMAIWSEDGQCYEAEIEEIDEENGTAAVTFAGYGNAEVTPLF
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaagaccttgctaagcagctggctagctacaaagctcagctccagcaagttgag
gctgccttatctgggaatgcagaaaatgaagatttgctaaaactgaagaaggacttacag
gaagtcatagaattaaccaaagatcttctttcaacacaaccttcggaaactcttgcaagt
tctgacagttctgcttctgctttgcccagtcactcctggaaggttggggataggtgcatg
gcaatatggagtgaggacggacagtgttacgaagctgagattgaagaaatagatgaagag
aatggaacagctgcggtcacatttgctggatatggcaatgctgaagttacgcctctgttc
aacctcaagcctgtggaagagggaaggaaagcaaaagaggacagtggcaacaaacccatg
tccaaaaaagagatgatagcccagcaacgagaatataaaaagaagaaagctttgaaaaaa
gctcagagaattaaagaacttgaacaggaacgagaggaccagaaagtcaagtggcaacag
tttaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcccctgagagcgtaaccggcaaagttggtgttggaacatgtggaattgcagacaaacct
atgacacagtatcaagatacctctaaatataatgtcaggcatttgatgcctcagtaa

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