Phaenicophaeus curvirostris (chestnut-breasted malkoha): 138731285
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Entry
138731285 CDS
T11607
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pcur Phaenicophaeus curvirostris (chestnut-breasted malkoha)
Pathway
pcur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138731285 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcur03041
]
138731285 (EFTUD2)
Spliceosome [BR:
pcur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138731285 (EFTUD2)
Complex C
U5 SnRNP specific factors
138731285 (EFTUD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
Motif
Other DBs
NCBI-GeneID:
138731285
NCBI-ProteinID:
XP_069733223
LinkDB
All DBs
Position
26:complement(5951658..6042830)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDEDDLGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVL
SPLLGNVCFASSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtatgatgagtttgggaactacatcgggccagagctggactcggac
gatgacgaggatgatctgggcagagaatccaaggatctggatgagctcgaggatgacgat
gatgatgacgacatgggggaccacgatgaggaccacccggggatggaggtggtgctgcac
gaggataagaaatactaccccaccgccgaggaggtgtacgggcccgaggtggagacgatc
gtgcaggaggaggacacgcagcccctcaccgagcctattattaaacctgtgaaaaccaaa
aagttctccctgatggagcagacgttaccagtcaccgtttatgagatggatttcctggca
gatctgatggacaactcggagctgattcgcaatgtgactctgtgtgggcatcttcaccac
ggcaagacgtgctttgttgactgcctgatagaacagacacacccagaaatccggaaacgc
tacgaccaggacctttgctacactgacatattgttcacagagcaagagaggggagtgggg
atcaagagcactccagtgacgattgttctgccagacaccaaagggaagtcttttctcttc
aacatcattgacactccaggtcacgtcaacttttctgatgaggtgacggccggccttcgt
atttcggacggtgttgtgcttttcattgatgcggctgagggggtgatgctgaacacggag
aggctgatcaagcacgcggtgcaggaaaggctggcagtgaccgtgtgcatcaacaagata
gaccggctgatcctggagctgaagttgccccctacagatgcttattacaaactccgacac
atcgtagacgaagttaacggtctgatcagcatgtattccaccgacgagaacctcgttctg
tctccccttctgggaaacgtgtgtttcgccagttcacagtacagcatctgcttcacgctg
ggatcttttgcaaagatttatgcagacacatatggtgacatcaattatcaagagtttgca
aagcggctttggggcgacatctacttcaacccaaagacccgcaagttcactaagaaggcc
ccaacaagcagttcccagcgcagcttcgtggagttcattctggagccactgtacaagatc
ttggctcaggtggtgggggatgtggacacaaccctgcccaggactctggatgaactcggc
atccacctgaccaaagaggaattgaaactgaacattcggcccctcctgcggcttgtctgc
aagaagttctttggggagttcacaggctttgtggacatgtgtgtgcagcacatcccatcc
ccgaaagtgggagcgaagacgaaaatcgagcacacctacaccggtggtgttgactccgat
ctaggggaggccatgagtgaatgcgaccccgacggtccgctgatgtgtcacacaacgaaa
atgtacagcaccgatgacggcgttcagttccacgcctttggcagagtgctcagtgggacc
atccacgccgggcagcctgtgaaggttctcggggaaaactacaccctggaagatgaggaa
gattcccagatctgcactgtcggacgcctctggatctcggttgcgaggtaccacatcgag
gtgaaccgggttcctgctggcaactgggtgctgattgaaggagtggaccagcccatagtg
aagacggcaaccgtcacagaacctcggggcaatgaggaggctcagatcttccgcccttta
aagttcaacaccacatctgtcatcaaaatagcggtagagcccgtcaacccctcagagctc
cccaaaatgttagatggtctccgcaaagtcaacaagagttacccttcgctcactactaag
gtggaagagtctggggagcacgtgatcctggggacaggggagctctacctggattgtgtg
atgcacgacctgcggaagatgtattcagagattgatatcaaggtcgctgacccagtggtg
acattctgcgagacagtggtggaaacgtcttccctgaagtgctttgcggagactcctaac
aagaagaacaagatcacaatgattgctgagcctctggagaagggactcgcagaggacatt
gaaaatgaagtggtccagatcacgtggaacagaaagaagctgggtgagttcttccagacc
aaatacgactgggatttgctggctgcccgttccatctgggccttcgggccagatgctact
ggcccgaacatcctagtagacgacacactgccctcagaggtggacaagtcgctgctgggc
tctgtgaaggacagcattgtgcaaggattccagtgggggaccagggaagggcctctttgt
gatgaactgatccgcaatgtgaagtttaagatcctggatgcagtgattgctcaggagccc
ttgcaccggggtggaggacagatcatcccaacggcccggagagtggtttattctgctttc
ctgatggccacccctcgcttgatggagccctactacttcgtggaggtacaggctcctgct
gactgtgtgtctgcggtgtacactgtcctggccaggcgaagaggccacgtgacgcaggat
gctccaataccaggctcccctctctacaccatcaaagccttcatcccagccattgattca
tttggatttgagacagacttgaggacccacacgcagggacaagccttctcgctctccgtc
ttccaccactggcagattgtgcctggtgaccccttggacaagagcatcgtcatcagaccc
ctggagccccagccggccccccatctggccagggagttcatgatcaagaccaggcgcagg
aagggcttgagtgaggacgtgagcatcagcaagttcttcgatgaccccatgttgctggag
ttggccaagcaagatgttgttctcaactaccccatgtga
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