Pectobacterium odoriferum: BCS7_17965
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Entry
BCS7_17965 CDS
T03424
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pcv
Pectobacterium odoriferum
Pathway
pcv00540
Lipopolysaccharide biosynthesis
pcv01100
Metabolic pathways
Module
pcv_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pcv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BCS7_17965 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcv01005
]
BCS7_17965 (lpxC)
Enzymes [BR:
pcv01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
BCS7_17965 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pcv01005
]
Lipid A
BCS7_17965 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AIU90570
UniProt:
A0ABD6VT86
LinkDB
All DBs
Position
complement(4074856..4075773)
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIDVDAPEIPIMDGSASPFVYLLLDAGI
EELNCAKKFVRIKQPVRVEDGDKWAEMKPFNGFSLDFTIDFNHPAIDAGNQRYRLDFSAD
AFVRQISRARTFGFMRDIEYLQSRGLCLGGSMDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGYNIIGAFSAFKSGHALNNKLLQAVLANQEAWEYVTFEDEAEMPLAFKAP
SIVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaacgtacattaaaacgtattgttcaggcgactggtgtcgggttacatacc
ggcaagaaggtcacgttgaccatgcgtcctgcaccggcaaataccggggtcatctatcgc
cgcacagacttgaatcccccggttgatttcccggctgatgcaaaatccgtgcgtgatacc
atgctctgtacttgtctggttaatgagcatgacgtgcgtatttctacggtggagcatctt
aacgctgcgcttgcggggttgggcattgacaatattgtcattgatgttgatgcaccggaa
attccaattatggatggcagcgccagtccgttcgtttacctgctgttagatgcgggtatc
gaagagctgaattgcgcgaagaagttcgtacgtatcaaacagccagttcgcgttgaagat
ggtgacaagtgggccgaaatgaaaccgtttaacggcttcagcttggatttcactatcgac
ttcaaccacccagcgattgatgcgggcaaccaacgctatcgtttggatttctctgctgat
gcgtttgttcgccagatcagccgtgcgcgtacgttcggcttcatgcgtgatatcgaatac
ttgcagtctcgtgggttgtgcctgggcggcagtatggattgtgccatcgtcgttgacgat
taccgcgtactgaacgaagacggtctgcgttttgaagatgagtttgtccgccataaaatg
ctggatgccatcggtgacctgtttatgtgtggctacaacatcatcggtgcgttttctgcg
tttaaatctggacacgcactgaacaacaaactgttgcaggctgtgctggcgaatcaggaa
gcgtgggaatacgtgacctttgaagacgaagctgaaatgccgttggcgtttaaagcaccg
tctatcgtgctggcgtaa
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