Phascolarctos cinereus (koala): 110192620 Help Entry 110192620         CDS       T05867                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism pcw  Phascolarctos cinereus (koala) Pathway pcw04010   MAPK signaling pathway pcw04064   NF-kappa B signaling pathway pcw04120   Ubiquitin mediated proteolysis pcw04140   Autophagy - animal pcw04144   Endocytosis pcw04380   Osteoclast differentiation pcw04620   Toll-like receptor signaling pathway pcw04621   NOD-like receptor signaling pathway pcw04622   RIG-I-like receptor signaling pathway pcw04657   IL-17 signaling pathway pcw04722   Neurotrophin signaling pathway pcw04936   Alcoholic liver disease pcw05132   Salmonella infection pcw05133   Pertussis pcw05135   Yersinia infection pcw05140   Leishmaniasis pcw05142   Chagas disease pcw05145   Toxoplasmosis pcw05152   Tuberculosis pcw05160   Hepatitis C pcw05161   Hepatitis B pcw05162   Measles pcw05168   Herpes simplex virus 1 infection pcw05169   Epstein-Barr virus infection pcw05170   Human immunodeficiency virus 1 infection pcw05171   Coronavirus disease - COVID-19 pcw05200   Pathways in cancer pcw05222   Small cell lung cancer pcw05235   PD-L1 expression and PD-1 checkpoint pathway in cancer pcw05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:pcw00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     110192620 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     110192620 (TRAF6)    04064 NF-kappa B signaling pathway     110192620 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     110192620 (TRAF6)    04140 Autophagy - animal     110192620 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     110192620 (TRAF6)    04621 NOD-like receptor signaling pathway     110192620 (TRAF6)    04622 RIG-I-like receptor signaling pathway     110192620 (TRAF6)    04657 IL-17 signaling pathway     110192620 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     110192620 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     110192620 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     110192620 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     110192620 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     110192620 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     110192620 (TRAF6)    05161 Hepatitis B     110192620 (TRAF6)    05160 Hepatitis C     110192620 (TRAF6)    05171 Coronavirus disease - COVID-19     110192620 (TRAF6)    05162 Measles     110192620 (TRAF6)    05168 Herpes simplex virus 1 infection     110192620 (TRAF6)    05169 Epstein-Barr virus infection     110192620 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     110192620 (TRAF6)    05135 Yersinia infection     110192620 (TRAF6)    05133 Pertussis     110192620 (TRAF6)    05152 Tuberculosis     110192620 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     110192620 (TRAF6)    05140 Leishmaniasis     110192620 (TRAF6)    05142 Chagas disease     110192620 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     110192620 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     110192620 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pcw04131]     110192620 (TRAF6)    04121 Ubiquitin system [BR:pcw04121]     110192620 (TRAF6) Enzymes [BR:pcw01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      110192620 (TRAF6) Membrane trafficking [BR:pcw04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     110192620 (TRAF6) Ubiquitin system [BR:pcw04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     110192620 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 SlyX zf-RING_5 zf-TRAF_2 TRAF3_RING RING_XB3-XBAT31 zf-RING_11 PUMA_CC U-box Med21 DUF4455 Spc29 DUF16 zf-U1 ATG16 DUF7310 CENP-F_leu_zip PspA_IM30 Rhabdo_ncap_2 zf-C2H2_4 HTH_63 Tropomyosin CEP104_ZnF Motif Other DBs NCBI-GeneID:  110192620 NCBI-ProteinID:  XP_020819548 UniProt:  A0A6P5IEG5 LinkDB All DBs Position Unknown AA seq 540 aa AA seqDB search MSLVNCEDSCGANQPDSDCCTAMASACSTGAKEDSVNGSTIPGNLSSSLMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIVKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNEGCLLKMELRHLEDHQTHCEFALAECPQCHLSFRKYLLHNHMIM ECPRRQVSCVNCAAPMPFEEKEFHDQNCPLATVFCEYCNTMLIREQMPNHYDIDCPIAPI PCTFSTFGCREKMQRNHLARHLQEATLAHMRMMAQAIENISMAVFSSGHEAPPYDGNSVS RTPSGCPQDVQNFQETIQQLESRLVIQDHQIRELTAKMETQSACVGDLKRTIRTLEDRIA EMEAQQCNGIYIWKINNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSAQR CANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPVRQNHEEIMDAKPELLAFQRP TIPRNPKGFGYVTFMHLQALRQRTFIKDDTLLVRCEVLTRLDMNSLRREGFQPRSTDVGV NT seq 1623 nt NT seq  +upstreamnt  +downstreamnt atgagtctggtaaactgtgaagacagctgtggtgccaaccaaccagacagcgactgttgt actgccatggccagtgcctgtagcactggcgcaaaggaggatagtgtaaatgggagcacc attcctgggaacctttccagctccttgatggaagagattcaaggctatgatgtggagttt gatccaccccttgaaagcaaatatgagtgtcccatctgtctgatggcattacgagaagct gtgcaaaccccgtgtggccatcggttctgcaaagcctgcattgtcaagtcaataagagat gcaggtcacaaatgccctgttgacaatgaaatactgttggaaaatcaactatttcctgac aactttgctaaacgggaaatcctctccctgacagtgaagtgtccaaatgaaggttgtctg ctgaagatggaactgaggcatctagaggatcaccagacacattgtgagtttgcccttgca gaatgcccacagtgccacctttcctttcggaaatatctccttcacaatcatatgatcatg gagtgtccaaggcgacaggtgtcgtgtgtgaactgtgctgcaccaatgccatttgaagag aaagagttccatgaccagaactgcccattggcaacagtcttctgtgaatactgcaacacc atgctcatccgggaacagatgcctaatcactatgatatagattgcccaatagctccaatt ccatgtactttcagtacatttgggtgtcgtgagaagatgcagaggaatcatttggctcgc cacctgcaagaggctactctggcccacatgcgaatgatggcccaggccatcgagaacatc agcatggcagttttcagttccgggcatgaggcccctccctacgatgggaactccgtatcc cggacgccctcaggatgcccccaagacgttcagaacttccaggaaaccatccagcagttg gagagtcgtcttgtaatacaagaccatcaaatccgagagctgactgctaagatggaaaca cagagtgcttgtgtgggggacctcaaacggaccattcgaaccctggaggacagaattgct gaaatggaggcacaacagtgcaatggcatttatatctggaagattaacaactttgggatg cacttgaaatctcaagaagaagagaagcctgttgtcatccacagccctggattctatact ggcaaacctggctacaaactctgcatgcgccttcacctgcagctgccaagtgctcagcgc tgcgctaactatatttccctttttgtccacacgatgcagggtgagtatgacagccacctt ccctggcccttccagggcacgatacgccttactattctcgatcagtctgaagcacctgtg aggcagaatcacgaagagatcatggatgccaaaccagagctgcttgccttccagaggccc accatcccccggaaccccaaaggttttggctatgtgactttcatgcacttgcaagccctt aggcaaagaaccttcattaaagatgataccttacttgtgcgttgtgaggttttgacacgc ctggacatgaatagcctaaggagggagggctttcagccacgtagtactgatgtaggggta tag

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