KEGG   Phascolarctos cinereus (koala): 110192697
Entry
110192697         CDS       T05867                                 
Name
(RefSeq) single-stranded DNA cytosine deaminase-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
pcw  Phascolarctos cinereus (koala)
Pathway
pcw03250  Viral life cycle - HIV-1
pcw05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:pcw00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110192697
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110192697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcw03019]
    110192697
Messenger RNA biogenesis [BR:pcw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110192697
SSDB
Motif
Pfam: NAD1 APOBEC2 SNAD4 APOBEC_N NAD2 APOBEC4 APOBEC4_like APOBEC3 APOBEC1 APOBEC_C dCMP_cyt_deam_1
Other DBs
NCBI-GeneID: 110192697
NCBI-ProteinID: XP_020819701
UniProt: A0A6P5ILI5
LinkDB
Position
Unknown
AA seq 260 aa
MPLRLNKEISEDEFYGQFSNVKASHQTLLCFSLKEDDKTLWKLWGHAYNNPGQCHAEILV
LREMEEYLVANIPNTTKYSITWFLSYSPCRWCCDEITNFLMKSQTKIEFNIKAARPYYFD
DDENQKGLKMLRRLGVLIKMMEYSDYEECLYLFVDPCTKFIAWPDLEVQSIANKMIFHHL
LAQDDNRLDNHLFTTDDSSPVHAGSTSDFESHVLINKFPPEDPNKTPDKKDEFSDIRTPQ
KTCFPQRTREFGKEVKRKLF
NT seq 783 nt   +upstreamnt  +downstreamnt
atgcctctgaggttaaataaagaaatatctgaagacgaattctatggacagttttctaat
gtaaaagcatcccaccaaactttgctctgctttagtctgaaagaagatgataaaacactt
tggaaattatggggccatgcttacaataatccaggccaatgtcatgctgaaatcttagtt
ttaagggaaatggaagaatatttagtggcaaatattcccaatactacaaagtacagcatt
acctggtttctttcctatagcccctgccgctggtgctgtgatgaaataaccaatttttta
atgaagtcccaaaccaaaattgaatttaacatcaaagcagcaaggccatattattttgat
gatgatgagaatcaaaaaggtttaaaaatgctcagaagactgggagttctgatcaaaatg
atggaatacagtgactatgaagaatgtctctacttatttgtggatccttgcaccaagttc
attgcatggccagatttagaagtgcaaagtatagcaaataaaatgatattccatcattta
ttggcccaggatgacaacagattagacaaccatttgttcacaacagatgattcttctcca
gttcacgctggatcaacatctgattttgaaagccatgtcttgatcaacaagtttccacca
gaagatcctaacaaaacaccagacaagaaagatgagttttcagatataagaactccacag
aaaacatgttttccccagagaacaagagaatttgggaaagaagtcaaaagaaaactcttt
tga

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