Phascolarctos cinereus (koala): 110202873 Help Entry 110202873         CDS       T05867                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism pcw  Phascolarctos cinereus (koala) Pathway pcw04015   Rap1 signaling pathway pcw04115   p53 signaling pathway pcw04145   Phagosome pcw04148   Efferocytosis pcw04151   PI3K-Akt signaling pathway pcw04350   TGF-beta signaling pathway pcw04510   Focal adhesion pcw04512   ECM-receptor interaction pcw04820   Cytoskeleton in muscle cells pcw05144   Malaria pcw05165   Human papillomavirus infection pcw05205   Proteoglycans in cancer pcw05206   MicroRNAs in cancer pcw05219   Bladder cancer Brite KEGG Orthology (KO) [BR:pcw00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     110202873 (THBS1)    04350 TGF-beta signaling pathway     110202873 (THBS1)    04151 PI3K-Akt signaling pathway     110202873 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110202873 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     110202873 (THBS1)    04148 Efferocytosis     110202873 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     110202873 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     110202873 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110202873 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     110202873 (THBS1)    05205 Proteoglycans in cancer     110202873 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     110202873 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     110202873 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     110202873 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pcw04131]     110202873 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pcw00536]     110202873 (THBS1) Membrane trafficking [BR:pcw04131]  Endocytosis   Phagocytosis    Opsonins     110202873 (THBS1) Glycosaminoglycan binding proteins [BR:pcw00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110202873 (THBS1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF EGF_CA Laminin_G_3 Laminin_G_2 TSP1_ADAMTS EGF TSP1_CCN Laminin_G_1 Motif Other DBs NCBI-GeneID:  110202873 NCBI-ProteinID:  XP_020834909 UniProt:  A0A6P5JV65 LinkDB All DBs Position Unknown AA seq 1172 aa AA seqDB search MGLAWGLVLLLLLEVCGTNRISESGSDNSVFDLFDLPGAANKGSGRRLVKGPDPSSPAYR IEDANRIPAMPDDKFQDLVDAIRAEKGFIFLASLRQMKKTRGTLMTVEYKDQSGHIFSLV SNGKAGTLDLSMAVQGKQQVVSVEEALLATGQWKSIVLFVQEDRAQLYVGCEKMENAELD APIESIFTRDLAGSARLRVAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNQII TLDNPVNGSSPAIRTNYIGHKTKDLQAICGFSCDELANVFLELKGLRTIVTTLQDSVRKV TEENELLSNVVKKAWSYPGCNYNGFQYNNNDMWTIDSCTECHCQNSVTMCKKVSCPLMPC SNATIPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSV QTRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGSGEITRIRLCNSPSPQMNGKPCEGEA RETKACQKEACPINGGWGPWSPWDICSVTCGGGLQKRSRLCNNPKPQYGGKDCMGDATGS QICNKQDCPIDGCLSNPCFAGAKCTSYPDGSWTCGACPPGYTGNGIQCKDVDECQEVPDA CFNHNGVHRCENTDPGYNCLPCPPRFTGSQPFGQGVEHATANKQVCKPRNPCTDGTHDCN KNAKCNYLGHYSDPMFRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKRDNC PNLPNSGQEDYDKDGIGDACDSDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCP YNHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPL EHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDD DNDGIPDDRDNCRLVPNPDQKDSDGDGRGDACRDDFDHDNVPDIDDICPENYDISETDFR RFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQLTQSYWDSTPTIAQGYAGLSVKVVNSTTGPGEHLRN ALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPI YDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctgggggcttgtcctcttactgctgctggaagtgtgtggcaccaacagg atctcagagtctgggagtgacaacagtgtgttcgacctctttgatctccctggtgctgcc aacaagggctctgggcgccgtctggtgaaaggtccagatccctccagccctgcttaccga attgaggatgccaataggatccccgccatgccagatgacaaattccaagacctggtggat gcaatccgagcagaaaagggctttatcttcctggcctccctgaggcagatgaaaaagacc cggggcaccctgatgactgtggagtataaggatcagtccggccatatcttcagtctagtt tccaatggcaaagcaggcactctggatctgagcatggctgtgcaggggaagcagcaggtg gtatcagtggaagaagctctcttggccacaggccaatggaagagtattgtcctgtttgtt caggaggaccgggcccagttgtatgtcggctgtgaaaagatggagaatgctgaattggat gcccccattgaaagcatcttcaccagggacctggctggcagtgccagactccgtgtggct aagggagatgtaaacgataactttcagggggtgctgcaaaatgtgaggtttgtctttgga accacaccagaggacatcctaaggaacaaaggctgttcaagctccaccaatcaaattatc acactcgacaacccagtaaatggttccagccctgccattcgcactaactacattggccac aagaccaaggacctgcaggcaatctgtggcttctcctgtgatgaactggccaacgtgttc ctggagcttaagggacttcggaccatagtgaccacgttgcaagacagtgtccggaaggtg actgaagaaaatgaactactctcaaatgtggtgaagaaggcttggtcctaccctggatgc aactacaatggatttcaatataataataatgatatgtggactattgatagttgcaccgag tgccattgccagaactcagtaaccatgtgcaaaaaagtgtcctgccccctcatgccctgt tccaatgccacaattcctgatggagagtgctgcccacgttgctggcccagcgattctgcc gacgatggctggtctccatggtctgagtggacatcctgttcggtgacctgtggcaatggg attcagcagagaggccgttcttgtgacagcctcaacaaccgatgtgaaggctcctccgta cagactcgtacttgccacattcaagagtgcgacaagagattcaaacaggatggaggctgg agtcactggtctccatggtcatcttgctctgtgacctgtggcagcggtgagatcaccagg attcgactctgtaactctcctagcccccagatgaatggaaagccatgtgaaggagaagca agagaaaccaaggcctgccagaaagaagcctgcccaatcaatggaggctggggaccttgg tcaccatgggatatctgctctgtcacctgtggaggaggactgcagaagcgtagccggctc tgtaataatcccaaaccccaatatggaggcaaggattgcatgggtgatgctactggaagc caaatctgtaacaagcaggactgtcccattgatggatgcctgtcaaatccttgctttgct ggtgccaagtgtaccagttaccctgatggctcttggacatgtggtgcctgtcctcctggc tacactggaaatggaatccagtgcaaagatgttgatgagtgccaagaggttcctgatgcc tgcttcaaccacaacggggtgcacaggtgtgagaacactgaccctggctataactgcctg ccttgtccaccacgcttcacaggatctcagccttttggacagggcgttgagcatgccact gctaacaaacaggtgtgcaagccacgtaatccctgcacagatggaacgcatgactgcaat aagaatgccaaatgcaattacttaggacattacagtgaccccatgttccgctgtgagtgc aagccaggctatgccggcaatggcatcatctgtggggaagacactgacttggatggctgg cccaacgaggaccttgtctgtgtcgccaatgcaacttatcactgcaaaagagacaattgc cctaaccttcccaactctggccaggaagactatgacaaagatggaattggtgatgcctgt gatagtgatgatgacaatgataaaatcccagatgacagggacaactgcccattccattat aacccagcccagtatgactatgatagagatgatgttggtgaccgctgtgacaactgtccc tataaccacaatccagaccaagcagacactgacaacaacggagaaggagatgcttgtgct gcagatattgatggagatggtatccttaatgagagagacaattgccaatatgtatacaac gttgaccaaagggatactgatatggatggtgttggtgaccagtgtgacaattgcccacta gaacataatccagatcagttggactccgactctgatcgtattggcgatacatgtgacaac aaccaggatattgatgaagatggccaccagaacaatctggacaactgcccctatgtgccc aatgccaatcaagctgatcacgacaaagatggcaaaggggatgcttgtgaccatgatgat gacaatgatggtatccccgacgacagagacaactgcagactggtgcccaatcctgaccag aaagattctgatggtgatggacggggtgatgcctgcagagatgactttgaccatgacaat gtcccagacattgacgatatctgcccagagaactatgacattagtgagaccgatttccga cgattccagatgatccctctggaccctaaggggacatcccagaatgatcccaactgggtt gtgcgtcaccagggtaaagagctggtccagactgtaaactgtgatcctggccttgctatt ggctttgatgaatttaatgccgtggacttcagtggcaccttctttatcaacaccgaaaga gatgacgactatgctggctttgtgtttggctaccaatccagcagccgcttctatgtcgtg atgtggaaacagctcacccagtcctactgggacagcactcccaccatagctcagggctat gcaggtctctcagtcaaagtggtcaactcaaccacagggccaggggagcacctgaggaat gctctgtggcacacaggaaacacccctggtcaggttcgaaccctatggcatgaccctcgt catattggctggaaagacttcactgcctacaggtggcgtcttagccacagacccaaaact ggtttcatcagagtggtgatgtatgaaggaaagaaaatcatggctgactcaggacccatc tatgacaagacctatgctggtggaagactaggattatttgtcttctctcaagaaatggtg ttcttctctgatcttaaatacgaatgcagagattcctaa

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