Phascolarctos cinereus (koala): 110206840
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Entry
110206840 CDS
T05867
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcw03041
]
110206840 (DHX9)
03012 Translation factors [BR:
pcw03012
]
110206840 (DHX9)
Enzymes [BR:
pcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110206840 (DHX9)
5.6.2.6 RNA 3'-5' helicase
110206840 (DHX9)
Spliceosome [BR:
pcw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110206840 (DHX9)
Translation factors [BR:
pcw03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110206840 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
ATPase
AAA_22
AAA_14
PhoH
T2SSE
XRN1_D1
Motif
Other DBs
NCBI-GeneID:
110206840
NCBI-ProteinID:
XP_020840028
UniProt:
A0A6P5K3Z1
LinkDB
All DBs
Position
Unknown
AA seq
1263 aa
AA seq
DB search
MGDVKNFLYAWCGKRKMTPTYEIRAVGNKNRQKFMCEVRVEGFNYTGMGNSTNKKDAQSN
AARDFVNYLVRVNEVKSEEVPAIGLSLLQIAPPVTDTTDSAEGGGGNLSSSLGGPLPPHL
SLQSDGTPGLGGSGYGPGTGPGGTWDRGANLKDYYSRKEEQEVQATLESEEVDLNAGLHG
NWTLENAKARLNQFFQKEKVQGEYKYTQVGPDHNRSFIAEMTIYVKQLGRRIFAREHGSN
KKLAAQSCALSLVRQLYHLGVVEAYSGLTKKKEGETVEPYTVNLSQDLEHQLQNVVQELC
LEIQPPPEDPNFPVVLNIGKLATFEPAQRQNQVGVVPWSPPQSNWNPWTSSNIDEGPLAY
ATPEQISMDLKNELMYQLEQDHELQAILQEREMLPVKKFENEILRAIHQNSVVIIRGATG
CGKTTQVPQYILDECIQNNRAAECNIVVTQPRRISAVSVAERVSYERGEEPGKSCGYSVR
FESVLPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAY
PEVRIVLMSATIDTSMFCEYFFNCPIIEVFGRTYPVQEYFLEDCIQMTQFIPPPKDKKKK
DKDDDGGDDDDANCNLICSDEYGPETKRCMAQMNEKETPFELIEALLKYIETLNVPGAVL
VFLPGWNLIYTMQKHLEMNPHFGSHRYRILPLHSQIPREEQRKVFDPVPTGVTKVILSTN
IAETSITINDVVYVVDSCKQKVKLFTAHNNMTNYATVWASRTNLEQRKGRAGRVRPGFCF
HLCSRARYDRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEH
TLRELDALDANDELTPLGRILAKLPIEPRLGKMMIMGCIFYVGDAVCTISAATCFPEPFI
SEGKRLGYVHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTW
EAKVQLKEILVNSGFPEECLMTQVFNNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILT
TEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKK
VQSDGEIVLVDDWIRLQMSHDAAACITALRAAMEALVVEVTKEPEIISNLDPSNERMLNM
IRQISRPSAAGISLMIGNARYGDGPRPPKMARYDNGGGFRGRGGQRGSGYQGGGYGGRGY
GGGANSYQGGYGSGGGYRGSGGGYRGSGGGYSGGMGGGGYRGSGGFPRGGNRGGYGMGFG
GGF
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgtcaaaaatttcctgtatgcatggtgtgggaaaaggaaaatgactccaacc
tatgaaataagagcagtggggaataagaacagacagaaattcatgtgtgaggttcgagtg
gaaggttttaattatactggtatgggcaattccaccaataagaaagatgctcagagtaat
gctgccagagattttgttaactacttggttcgagtgaatgaagttaagagtgaagaagtt
ccagctattggactttctcttctgcagatagcacccccagttactgatacaactgactca
gcagagggtggtggtggaaatttatcatctagtttgggaggacctcttcctcctcatctg
tctctccaatcagatggtacaccaggactcggaggctctggttatggccctggtactggt
cctggtggcacatgggatcgtggagccaacttaaaggattactactccagaaaggaggag
caagaagtacaagcgactctagaatcagaagaagtggacttaaatgctggtcttcatgga
aactggaccttggaaaatgctaaggctcggctgaaccagtttttccaaaaggagaaggtc
cagggagaatataaatacacccaagtgggtcccgatcacaacaggagctttattgcagaa
atgaccatttatgtcaagcaactgggcagaaggatttttgcacgtgaacatggttcgaat
aaaaagctggcagcacagtcttgtgcactgtcccttgtcaggcagctctaccatcttgga
gttgttgaagcttactctgggttgacaaagaagaaggaaggagagacggtggaaccttac
acagttaacctgtctcaagacttagaacatcagctgcaaaatgttgttcaggagttgtgc
ctagaaattcagccaccacctgaagatcctaattttccagttgtactcaatattggcaaa
ctagctacctttgaaccggctcagcgacagaaccaggttggggttgttccctggtcacct
cctcagtctaactggaatccatggactagtagcaacattgatgaaggccctttggcttat
gccactcctgagcaaataagcatggacctgaagaatgaacttatgtaccagctagaacag
gatcatgagttacaggcaatcctgcaggagagggagatgctacctgttaagaagtttgag
aatgaaatcttgagggcaatccatcaaaattcagttgttattattcgtggtgccactgga
tgtggcaaaactacccaggttcctcagtatattctggatgaatgcattcaaaacaaccgt
gcagccgagtgtaacatagtagtgactcagcccaggagaatcagtgctgtttctgtggca
gaacgagtttcttacgagagaggagaagaacctgggaaaagctgtggctacagtgtacga
tttgagtctgtgcttccccggcctcatgccagtattatgttctgtaccgtaggtgtacta
ctgaggaaattggaagcaggcattcgtggaatcagtcatgtgattgtagatgaaatccat
gaaagagacattaatactgactttcttttggtggtattaagggatgtagtacaggcttat
cctgaagtacgcattgtcctcatgtctgctactattgataccagcatgttctgtgaatat
ttcttcaattgtcctatcatcgaagtctttggaagaacttacccagttcaagagtatttt
ttggaagactgtattcagatgacccagttcattcctccaccaaaggacaagaagaaaaaa
gacaaagatgatgatggtggtgatgatgatgatgcaaactgtaacctaatctgcagtgat
gaatatggtccagaaacaaagcgttgcatggcgcagatgaatgagaaggaaactccattt
gaacttattgaggcacttctgaagtacattgagacacttaatgttcctggagcagtgctg
gttttccttcctggctggaacttgatatatactatgcagaagcatttagaaatgaatccc
cattttggaagccaccggtatcggattctgcccctgcattctcagattcctagagaagaa
cagcgaaaagtatttgatccagtaccaactggagtaaccaaggttattttgtccacaaat
attgctgagaccagcattaccattaatgatgtcgtttatgttgttgactcctgcaagcag
aaagtgaaactgttcaccgcgcacaataacatgaccaactatgctacagtgtgggcgtct
agaacaaatctggaacaacggaagggacgagctggccgcgtacgacctggcttctgtttt
catctctgcagcagagctcgttatgacagacttgaaactcacatgacccctgaaatgttc
cgaacaccactgcatgaaattgctttgagtatcaaactgcttcgtctaggaggaattggt
cagttcctggccaaagcaattgaaccaccacctttggatgctgtgattgaagcagagcac
accctcagagagcttgatgcactagatgctaatgatgaattgacacctcttggaaggatc
ctggctaaactcccaattgagccccgccttggcaaaatgatgataatgggttgtattttc
tacgtgggggatgctgtgtgtaccatttctgctgccacttgcttcccagagccttttatc
agtgaaggcaagcgcttgggttatgtccaccgcaattttgctggaaataggttttcagat
cacgtggcccttttgtcagtgttccaagcctgggacgatgccagaatgggtggagaagag
gcagagatccgcttttgtgaacacaaaagactcaatatggccacactcaggatgacttgg
gaagcaaaagttcagctcaaagaaattctggttaattctgggtttccagaagaatgtctg
atgacacaagtatttaataatacgggaccagataacaatttggatgttgtcatctctctt
ctggcctttggtgtgtaccctaatgtctgctatcataaggaaaagaggaaaattctcacc
actgaggggcgaaatgcacttatccacaagtcatctgttaactgcccctttagcagccag
gacatgaagtacccatctcctttctttgtatttggagaaaagatccgcactcgagccatc
tctgccaaaggcatgaccttagtgacccccctacagctgctcctgtttgcctctaagaag
gtccaatcagatggggagattgtgttggttgatgactggatcagactacaaatgtcccat
gatgctgctgcttgcataactgcccttcgagcagccatggaggcactggttgttgaagta
accaaagaacctgaaataatcagcaatttggatccctcaaatgagcgtatgctgaacatg
attcggcaaatctccaggccttcagctgctggcattagtctcatgattggcaatgcacgg
tatggagatggtcctcgcccacccaagatggctagatatgacaatggaggtggattcaga
ggtcgaggtggtcagcgaggttctggctatcaaggtggaggatacggtgggagaggatat
ggtgggggcgctaattcttaccaaggagggtatggaagtggaggaggatacaggggctca
ggtggtggttatagaggatctggaggaggctacagtggaggaatgggtggaggaggatat
agagggtctgggggattccctcgaggaggaaacagaggtggttatggtatgggttttgga
ggtggcttttga
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integrated database retrieval system
