Entry |
|
Symbol |
TRPC6
|
Name |
(RefSeq) short transient receptor potential channel 6 isoform X1
|
KO |
K04969 | transient receptor potential cation channel subfamily C member 6 |
|
Organism |
pcw Phascolarctos cinereus (koala)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pcw00001]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
110215009 (TRPC6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110215009 (TRPC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:pcw04040]
110215009 (TRPC6)
Ion channels [BR:pcw04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110215009 (TRPC6)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
903 aa
MNQNSPYGPRRVCTPGTGARRNESQDYLLIDSELCDDNSLQQPSALPPYGYYPCIRGTDN
RLAHRRQTILREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEECL
SLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILN
HPAFAEGKRLATSPSQSEIQHDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKG
ARIERPHDYFCKCSECNQKQKHDSFSHSRSRINAYRGLASPAYLSLSSEDPVMTALELSN
ELAVLANIEKEFKNDYKRLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEVSPNNGDHGRP
SLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTIAVKFLVVLAVAAGLPFLA
LIYWFAPCSKMGRIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGPKLRPNETNMENGK
QLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWSQGPKEYLFELWNMLDFGMLAIFAASF
IARFMAFWHASKAQSIVDANDTLKDLTSVGDNVKYYTLARIKWDPSDPQIISEGLYAIAV
VLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYHGAK
QNEAFTTVEESFKTLFWAIFGLSEVKSVVINSNHKFIENTGYVLYGVYNVTMVIVLLNML
IAMINNSFQEIEDDADVEWKFARAKLWFSYFEEGQTLPVPFNLVPSPKSLFYLLLKLKRW
ISELFWGHKKGFEEDAEMNKLGHSKQSSIRSSEDLHLNSLNNPPRQYQKIMKRLIKRYVL
KAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLAELIRKLGEKLSIEPNQEV
SNR |
NT seq |
2712 nt +upstreamnt +downstreamnt
atgaatcagaactctccctatggccctcgcagggtctgcactcctggaaccggagcccgg
agaaatgagagccaggattacctactcatcgactcggagctttgcgatgataactcgcta
cagcagccctcggccctgcctccctatggttactatccctgcattcggggcactgacaac
agactggcccatcgtcgacagaccatcctccgagagaaagggagaaggttagcaaatcga
ggaccagcatatatgttcaatgaccactcaacaagcctgtctattgaggaggaacgcttt
ttagatgcagcagagtatggtaacattcctgtagtgcgaaagatgctagaagaatgcctc
tcactcaatgtgaactgtgtggattacatgggccagaatgctttgcagctggctgtggcc
aatgagcatctggaaattactgaacttttgcttaagaaagaaaatttgtcccgggttggg
gatgccttgctcctggcaattagtaaaggttatgttcggattgttgaagcaatcttaaac
catcctgcttttgctgagggcaagaggctggcaacaagccctagccagtcagaaatccag
catgatgacttttatgcctatgatgaagatggaacccggttctctcatgacgttactccc
atcattctggctgctcactgccaggaatatgaaattgtgcacactcttttgaggaaagga
gcccggattgaaaggcctcatgactatttctgcaagtgtagtgaatgcaaccagaagcag
aaacatgactctttcagtcactcaagatcccgaattaatgcctataggggtctggcaagt
cctgcttatttgtcattgtctagtgaagatcctgtcatgacggccctagaacttagcaat
gagctggcagtgctggcaaacattgaaaaggagtttaagaatgactacaaaagattgtca
atgcagtgcaaagattttgttgtcggacttcttgatctttgcagaaacacagaagaagtg
gaggccattctgaatggggatgttgaagtgagccctaataatggagaccatgggcgtcca
agcctcagtcgtttaaaacttgctattaaatatgaagtcaaaaaatttgtagcccatcca
aactgccagcaacagcttctctccatctggtatgagaatctctcaggtttaaggcagcag
acaattgctgtcaagtttctagtggtccttgctgtggcagctggcttgcccttcctagct
ctgatttactggtttgctccatgcagcaagatgggaaggataatgcgtggaccattcatg
aagtttgtagcacatgctgcctctttcaccattttcctgggactcctagttatgaatgca
gctgatagattcgaaggccccaaactccgccctaatgaaactaacatggaaaatggaaaa
cagctgttcaggatgaaaacatcctgcttctcatggatggagatgctcattatatcctgg
gtaataggaatgatatgggctgaatgtaaagaaatttggtcccaaggtcccaaggaatat
ttgtttgagctatggaatatgctggattttggtatgttagccatctttgcagcatcattc
attgctaggttcatggcattttggcatgcttccaaagcccagagcattgtggacgcaaat
gatactttgaaagacttgacctctgtgggagacaatgtgaagtactacactttggccagg
ataaaatgggacccatctgatcctcaaatcatatctgaaggcctatatgctattgctgta
gttttaagtttctctagaattgcctacatcttaccagctaatgaaagctttgggcctcta
caaatatccttgggaaggaccgtgaaagacatcttcaaattcatggttatattcatcatg
gtatttgtggctttcatgatagggatgtttaatctctattcctattaccatggagcaaag
caaaatgaagccttcacaacagttgaagaaagctttaagacattgttctgggctatattt
ggactctctgaagtgaaatctgttgtcataaactctaaccacaaattcattgagaatact
ggttacgttctttatggagtatataatgtgaccatggtcattgttttgctgaatatgctc
attgcaatgatcaacaactcattccaggaaattgaggacgatgctgatgtggagtggaag
tttgcaagggctaaactttggttttcttactttgaagagggacaaacacttcctgttccc
ttcaacttggtgccaagtccaaagtctctgttctatctcttactcaaacttaaaagatgg
atttctgagctcttttggggtcataaaaaagggtttgaggaagatgcagagatgaacaag
cttggtcacagcaagcaatcaagcataaggagctcagaagatctgcatctaaacagtctc
aataaccctcccagacaataccagaaaataatgaagcggctcatcaaaagatacgtactg
aaagcgcagatagataaggagagtgatgaagtcaatgaaggtgaactgaaggaaataaaa
caggacatctcaagtctccgctacgaacttcttgaggaaaaatcccagaacacagaagat
ctagcagaacttattagaaaacttggggagaaattgtcaattgaaccaaatcaagaagtt
agcaatagataa |