Phascolarctos cinereus (koala): 110215889
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Entry
110215889 CDS
T05867
Symbol
SCN4A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pcw
Phascolarctos cinereus (koala)
Brite
KEGG Orthology (KO) [BR:
pcw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pcw04040
]
110215889 (SCN4A)
Ion channels [BR:
pcw04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110215889 (SCN4A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
110215889
NCBI-ProteinID:
XP_020853383
UniProt:
A0A6P5L5M9
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MASPPVPMLVPPGPDCLRPFTLESLQAIEKRAIEEEARLLRNKQLEVEEPERKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYMLSPFSKI
RRGAIKVLIHSLFSLFIMITILANCVFMTMSDPPPWSKNVEYTFTGIYTFESLIKILARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDMGNISALRTFRVLRALKTITVIPGLKTIV
GXLIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVKWPPPFSGINETWYDXGTA
LFSNETGFGNNTEYSNFTFDWDAYINDEGNFYFLEGALDALLCGNSSDAGHCPEGYECMK
AGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIFLGSFY
LINLILAVVAMAYAEQNDATLAEEQEKEEEFQQMLEKLKKHQEEQEKLVSAQAALENGEG
DGDLQMQGKDCNGGLDTEEVPSNPHRQSCSMESAVSDAMEELEEAHQKCPPWWYKCAHTL
LVWNCCAPWVKLKKIVYLIVMDPFVDLGITICIVLNTVFMAMEHYPMTPQFEHVLTVGNL
VFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLMR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINS
SCTLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQPMCLIVFLMVMVIGNLVVLN
LFLALLLSSFSADSLAASDEDGEMNNLQIAIARISWGIDYAKAFFLALLHGQILAPGDMK
QGPEKAEDEEGGAEEKKEQQQQQEEEEELKKDNHILNHIGVVECSPTSIELDHMNFINNP
YLTVQVPIASEESDLEMPTEEETDTFSEAEDIKKPPPPKCDGNSSVCSTADYKPPEEEEQ
PQEEENPEGELPEECFTEACVKRFPFLYVDITSDRGKIWWNLRKACFRMVEHNWFETFIV
FMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYVFVLEMLLKWVAYGFKVYFTNAWC
WLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIP
SIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTTTSEIFDISVVNNMSDCFKLMNTGEV
RWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSREVEEQPQYEVNIYMYIYFVLF
IIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRP
QNKIQGMVYDFVTKQAFDITIMFLICLNMVTMMVETDDQSQLKIDILYNINMVFIIIFTG
ECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRVIRLARIGRV
LRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFN
FETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPDLENPGSSVKGDCGNPSIGICFF
CSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIAYS
RLSDFVDTLQEPLRIAKPNKIKLVTLDLPMVPGDKIHCLDILFALTKEVLGDSGEMDALK
QTMEEKFMAANPSKVSYEPITTTLKRKHEEVCATKIQRAYRRHLLKRSVKQASYLYRHSG
DSSGSEAPEKEGLIADTMNKMYGNNSSQKEEDKATGEAGPALGLKPIDAPDSSQSSPEPQ
RQRVRPGVKESLV
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccacctgtgcccatgcttgtgccccctggacccgactgcctgcgtcccttc
actcttgagtccctgcaggccatagagaagcgggcaatagaggaggaggcaagactcctt
cggaacaagcagcttgaggtggaggagcccgagaggaagccacgaagtgacctggaagcg
gggaagaatctgcccctcatctatggagaccccccacctgaggtcatcggcatcccactg
gaggatctggatccctactacagtgacaagaagaccttcatcgtgttgaacaagggaaaa
tccattttccgattctcagccaccccagccctgtatatgctgagccccttcagtaagata
aggcgtggggccatcaaagttctcatccactcgttgttcagcttattcatcatgatcacc
atcctggcaaactgtgtgttcatgaccatgagtgacccaccaccctggtccaaaaacgtg
gagtacacctttacaggaatctacacctttgagtccctcatcaagatacttgcccgaggc
ttctgcattgatgacttcacattcctccgggacccctggaactggctagacttcagtgtc
atcatgatggcgtacctgacagagtttgtggacatgggcaacatctcagccctgaggacc
ttccgtgtgcttcgagccctgaagactataacagtcattccaggactgaagacaattgta
gggncactgatccagtcggtgaagaagctgtcggatgtgatgattctcacagtcttttgc
ctgagtgtcttcgccttagttgggctccagctcttcatggggaatctgaggcaaaagtgt
gtgaaatggccaccccccttcagtggcatcaatgagacttggtatgacnatgggacggcc
ttgttcagcaatgagacaggttttggtaacaacacagaatacagcaactttacctttgac
tgggatgcctacatcaatgatgaagggaacttctatttcctggagggtgcccttgatgcc
ttgctctgtggaaacagcagcgatgcagggcactgtcctgagggctacgagtgcatgaag
gcaggcaggaatcccaactatggttacaccagttatgacaccttcagctgggccttcctt
gccctcttccgactcatgacacaagactattgggagaacctcttccagctgacccttcgg
gcggctggcaagacctacatgatcttctttgtagtcatcatcttcctgggctccttctat
ctcatcaacctcatcctggcggtggtggccatggcctacgcggagcagaatgatgccacc
ctggcagaggagcaagagaaggaggaggagttccagcagatgctagagaaactcaagaag
caccaggaggaacaggagaaactggtcagcgctcaagcagccctggagaatggtgaggga
gatggggacctgcagatgcaggggaaggattgcaatggtggcctggatacagaagaggta
ccatctaacccccacagacagagctgcagcatggaaagtgccgtctcggatgccatggaa
gagttggaggaggcccatcagaagtgcccaccatggtggtacaagtgcgcccatacgctg
ttggtgtggaattgctgtgctccatgggtgaagttaaagaagatcgtatacctgattgtc
atggacccctttgtggacctgggcatcaccatctgcattgttctcaacacagtcttcatg
gccatggagcattaccccatgactccccagtttgagcatgtgctcactgtgggcaacctg
gttttcacaggcatcttcaccgcagagatggtgctgaagctgattgcaatggatccgtat
gagtacttccagcagggatggaacatctttgacagttttattgtcaccttgagcctggta
gagctggggctggccaatgtacaagggctctctgtgcttcgatccttccgcttgatgaga
gtcttcaagctggccaagtcctggcccacattgaacatgctcatcaagatcattggtaac
tcagtcggggccttgggaaacctgacgctggtgttggccatcatcgtcttcatcttcgcc
gtggtgggcatgcaactctttgggaagagctataaggagtgcgtgtgtaagatcaattcc
agctgcaccctgccccgctggcacatgcatgacttcttccactccttcctcattgtcttc
cgcatcctgtgtggcgagtggatcgagaccatgtgggattgtatggaggtggccggtcag
cccatgtgcctcatcgtctttctcatggttatggtcatcggaaaccttgtggtcctgaat
ctgttccttgccctgctcctgagctctttcagtgccgacagcctggcagcctcagacgag
gatggggagatgaacaaccttcaaattgctatcgctcgcatctcctggggcattgattat
gccaaggccttcttcctggccctcttacatggtcagatcctggctcctggggacatgaag
cagggacctgagaaggctgaggatgaggaaggtggagcagaagagaagaaggagcagcag
cagcagcaagaggaagaggaagagttaaagaaggacaaccacatcctgaaccacattggg
gtggtggaatgctcaccgactagtattgaacttgaccacatgaacttcatcaacaaccca
tacttgacagtgcaggtgcccattgcttctgaggagtctgacctcgagatgcccacagaa
gaggaaacagacacattttctgaggctgaagacattaagaagccgccccctcccaagtgt
gatgggaactcctcggtatgcagcactgctgactacaagccacctgaagaagaagagcag
ccccaggaagaggagaaccctgaaggagagctccccgaggagtgtttcactgaggcctgt
gtaaagagattccctttcctctatgttgacatcacctcggatcgggggaaaatatggtgg
aaccttcgaaaggcttgcttcaggatggtggagcacaattggtttgagacattcattgtg
ttcatgatcctactcagcagcggggccttggcattcgaagacatctacattgagcaacgg
aaggtgatccggacgatcctagagtatgcagacaaggtcttctcctatgtatttgtcttg
gagatgctgctcaagtgggtggcttatggctttaaggtgtacttcaccaacgcctggtgc
tggcttgacttcctcattgtagatgtctccatcatcagcctggtggccaattggttgggc
tactctgaacttgggcccatcaagtcactcaggacgcttcgagcactcaggccactccga
gccctgtccagattcgaaggcatgagggtggtggtgaacgcccttctgggcgccatcccc
tccatcatgaatgtgttgctcgtctgcctgatcttctggctcatcttcagcatcatgggg
gtcaacctattcgcagggaagtattaccgatgcatcaacaccaccacctcggagattttt
gacatctctgttgtcaacaacatgtcggactgcttcaaactgatgaataccggggaggtc
cgatgggtcaatgtcaaggtcaattttgacaatgtgggccttggctacctctcactgctg
caggtggctactttcaagggctggatggatatcatgtatgcagctgtagattcccgagag
gttgaagaacaaccccagtatgaggtgaatatttatatgtacatctactttgtcctcttc
atcatctttggcgcattcttcaccctcaatctcttcattggagtcatcattgacaacttc
aaccagcaaaagaagaagtttggaggaaaggacatcttcatgacagaagaacagaaaaaa
tactacaatgccatgaaaaaactgggttccaagaagccacagaagccaattcctcgacct
cagaacaagattcagggcatggtgtatgactttgtgaccaagcaggcgtttgacatcacg
atcatgttcttgatctgtctcaacatggtcaccatgatggtagagacagatgaccagagc
cagctcaagattgacattctttacaacatcaacatggtcttcatcatcatcttcacaggc
gagtgcgtgctcaagatgctagcgctgcgtcaatactacttcactgttggctggaacatc
tttgacttcgtggtggtgatcctctccattgtgggccttgccctttctgacttgatccag
aaatactttgtttcacccacattgttcagagtgattcgtctggctcggatagggcgcgtc
cttaggctgattcgaggtgccaagggaatccggaccttgctctttgccctcatgatgtct
ctgcctgccctcttcaacattggcctgctcctcttccttgtcatgttcatctattccatc
tttggcatgtccaactttgcctatgtaaagaaagaatctggcatcgatgacattttcaac
tttgagacctttggcaacagcatcatttgccttttccagatcactacctcggctggctgg
gatgggcttctgaaccccatccttaacagcggaccccctgactgtgaccccgatctggag
aacccaggcagcagcgttaagggtgattgtggcaacccttccataggcatctgcttcttc
tgcagctacatcatcatctccttcctcattgttgtcaacatgtacatcgccatcattctg
gagaacttcaacgtggctactgaggagagcagtgagccattgggggaggatgactttgag
atgttctacgagacatgggagaagtttgacccagatgccacacagttcattgcctacagt
cgcctctctgactttgtggacaccctgcaggagccgctgaggattgccaaacccaacaag
atcaaacttgtcactctggatcttcccatggtccctggagacaagattcactgcctagac
atactctttgctttaactaaagaggttctaggggactccggtgagatggatgccctcaaa
cagaccatggaggaaaagttcatggcggccaacccatccaaggtctcctatgaacccatc
actactaccctgaagaggaagcatgaggaggtatgtgctacaaagatccagagagcctac
cgccggcatctgcttaagcgttcagtgaagcaggcctcttatctctaccggcatagtgga
gacagcagtgggtctgaggccccagagaaggaggggctgattgcggataccatgaacaag
atgtatgggaacaacagctcccagaaagaggaggataaagcaacaggggaggctggccct
gccctgggtctcaagcccattgatgctccagactcaagccagtcatccccagagccacag
cggcaaagagtacgccctggagtcaaggagtcacttgtctaa
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integrated database retrieval system
