Paenibacillus crassostreae: LPB68_05240
Help
Entry
LPB68_05240 CDS
T05196
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pcx
Paenibacillus crassostreae
Pathway
pcx00300
Lysine biosynthesis
pcx00550
Peptidoglycan biosynthesis
pcx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPB68_05240
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LPB68_05240
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcx01011
]
LPB68_05240
Enzymes [BR:
pcx01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LPB68_05240
Peptidoglycan biosynthesis and degradation proteins [BR:
pcx01011
]
Precursor biosynthesis
Amino acid ligase
LPB68_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Motif
Other DBs
NCBI-ProteinID:
AOZ91679
UniProt:
A0A167C3V2
LinkDB
All DBs
Position
complement(1052921..1054405)
Genome browser
AA seq
494 aa
AA seq
DB search
MRFNELASTLTIKRIVGSGDITVSGIQTDSRKVSSGDLFICLPGHTVDGHLYAEQAKENG
AVALVVDHQLDIELPQLIVKDCRFAMAVIADSFFGSPSKQMKVIGITGTNGKTTTSYLIE
KIMNDHGVKTGLIGTIQMSYGGRTFPMSGTTPEALELQRSFHDMAVSGTRCCVMEVSSHA
LEQGRVKGTDFHTTVFTNLTQDHLDYHHSMEDYRSAKGLLFARMGNAFQGSPDKRKFAVL
NADDPASSYFKKLTSSEVITYGMEDGADVRATQISISSQGTEFHVDSFRGSTDIKLKMVG
KFNVYNALAAITATLLEGIELEEIKRSLETLAGVDGRVESVDAGQPFAVIVDYAHTPDGL
ENVLKTVKEFAQGRVLTVFGCGGDRDKTKRPLMGKISAKYSDMIFVTSDNPRTEDPEAIL
KDIELGLIEDQVSSDSYQLIVDRRAAIQKAIDMASPEDVVLIAGKGHETYQKIGQMTLDF
DDRVVAKEAIRGIR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagatttaatgaactagcatctactttaacgattaaacgaattgtcggaagtggtgat
attacagtatccggtatacagacagattctcgtaaagtaagctcgggagatttatttatt
tgtttacccggtcatacagtagacggacatctttatgccgaacaagctaaagagaatggt
gctgtagcccttgttgtagatcatcaattggatattgaattaccacaacttattgtgaag
gattgccgatttgctatggctgtaattgcagattcgttttttggctcacctagcaagcaa
atgaaggtgattggaattacaggtaccaatggaaaaacaacaacttcttatctgatagag
aagattatgaatgatcatggtgtaaaaacagggttgattggaactattcaaatgagttat
ggaggccgaacctttccaatgtcaggaacaactccagaggcattggaattacaacgttct
tttcatgatatggcagttagtggtactcgttgctgtgtgatggaagtgtcttcccacgca
ttggaacaagggcgggtaaaagggactgatttccatacaacggtatttaccaatcttaca
caggatcatttagattatcatcacagtatggaggattatcggtcggctaaaggattgctt
tttgcgagaatgggtaacgccttccagggtagtccagataaacgaaagtttgctgtactg
aatgcagatgatcctgcatcttcttatttcaagaagttaacttcttcagaagtgattaca
tatggtatggaagatggtgcagatgtccgggcaactcagatttcaattagctcacaaggt
actgaattccatgtcgattctttcagaggaagtacggatattaaacttaaaatggtgggt
aaatttaacgtttataacgctctcgctgcaattacagcaacattacttgaaggaattgag
ttagaggaaataaaaagaagtcttgaaacattagctggtgttgatggacgagtagaatcg
gtagatgctggtcagccttttgcagtaattgtcgattatgctcatacaccagatggtctt
gagaatgttttgaagacagttaaggagttcgcacaaggacgtgtactcacagtctttggt
tgtggtggtgatcgtgataagacaaagcgcccactaatgggtaaaatttcggctaaatat
agtgatatgatcttcgtaacttctgataatcctcgtacagaagatccagaagctatacta
aaggatatcgaacttggacttattgaagatcaagtatctagcgatagttaccaacttatt
gtagatcggcgtgcagctattcaaaaggctattgatatggcaagccctgaagatgtagta
ttgattgcggggaaaggtcatgagacctatcaaaaaattggacagatgactcttgatttc
gatgatcgtgtcgtcgccaaggaagcgataaggggtatacgctag
DBGET
integrated database retrieval system
