Pseudomonas chlororaphis PCL1606: PCL1606_27630
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Entry
PCL1606_27630 CDS
T03768
Name
(GenBank) RND transporter
KO
K18300
outer membrane protein, multidrug efflux system
Organism
pcz
Pseudomonas chlororaphis PCL1606
Module
pcz_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pcz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcz02000
]
PCL1606_27630
01504 Antimicrobial resistance genes [BR:
pcz01504
]
PCL1606_27630
Transporters [BR:
pcz02000
]
Other transporters
Pores ion channels [TC:
1
]
PCL1606_27630
Antimicrobial resistance genes [BR:
pcz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
PCL1606_27630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
RFamide_26RFa
Motif
Other DBs
NCBI-ProteinID:
AKA24214
UniProt:
A0A0D5XZT2
LinkDB
All DBs
Position
complement(2975832..2977253)
Genome browser
AA seq
473 aa
AA seq
DB search
MSSKVFLPSLLVLALSACAVGPDYQTPATEAAHISAATDGASGQKNFDRARFEGIWWQQF
DDPVLNQLVTRSLQGNRELRVAFARLRAARAIRDDASNDAMPTITSRASSDLAKGQIPGQ
TTRRVNSERYDLGLDMAWELDLFGRIQRNLEATEADQQAAEADLYQLQVTMIAELVDAYG
QLRGAQLREKIALANLENQQESRKITESLRDAGVGDQLDVVRADARLAAVEASVPQLQAE
QVRQRNRIATLLGERPEQLSVDLKPAQLPAIAKALPIGDPGELLQRRPDILSAERQLAAA
TARIGVAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLR
GANAEADGALATYEQQVLLALEESENAFSDYGKRQQRLISLIRQSESSRAAADLAEIRYR
EGTVDFLVLLDAQRERLAAEDSQAQAEVDLYRGIVAIYKALGGGWQPETVASN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaaagtcttcctgccaagcttgctggtactggccctgagtgcctgtgccgtg
ggcccggactaccagaccccggccaccgaggcggcgcacatcagcgccgccaccgacggc
gcctcgggccagaagaatttcgaccgcgcgcgtttcgaaggcatctggtggcaacagttc
gacgatccggtgctcaaccagttggtgacccgctccctgcagggcaaccgtgagttgcgc
gtggccttcgcccgcctgcgggccgcccgggcgattcgcgacgacgccagcaacgatgcc
atgccgaccattaccagccgcgccagcagcgacctggccaagggccagatcccgggccag
accacccgccgggtcaacagcgagcgctacgacctgggcctggacatggcctgggagctg
gacctgttcggccgcatccagcgcaacctggaagccaccgaagccgaccagcaggccgcc
gaggccgacctctaccaactgcaggtgaccatgatcgccgagctggtggacgcctacggc
cagctgcgcggcgcccagctgcgggaaaagatcgccctggccaacctggagaaccagcag
gagtcgcgcaagatcaccgaaagcctgcgtgacgccggcgtcggcgaccagctcgacgtg
gtccgcgccgatgcgcgcctggccgcggtagaagccagcgtgccgcaactgcaggccgaa
caggtgcgccagcgcaaccgtatcgccaccctgctcggcgagcgtccggagcaactgagc
gtcgacctcaagcctgcgcagttgccggcgatcgccaaggcgttgccgatcggcgatccg
ggcgagctgttgcagcgccgtcccgacatcctcagcgccgaacgccagctggccgccgcc
accgcgcggatcggcgtggccaaggccgacctgttcccacgggtcagcctcagcggtttc
ctcggtttcaccgccggccgcggttcgcagatcggttcctcggccgccaatgcctgggcc
ctgggcccgagcattacctgggccgccttcgacctgggcagcgtgcgcgcccgcctgcgc
ggcgccaacgccgaggccgacggcgccctggcgacctatgagcaacaagtgctgctggcc
ctggaagagtcggaaaacgccttcagcgattacggcaagcgccagcaacgcctgatctcg
ctgatccgccagagcgaatcgagccgcgccgccgccgacctggccgagatccgctaccgc
gaaggcaccgtggacttcctggtgctgctcgacgcccagcgcgaacgcctggccgccgaa
gactcccaggcccaggccgaggtcgacctgtaccgcggtatcgtcgccatctacaaggcc
ctgggcggtggctggcagccggagaccgtcgccagcaactga
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