Phoenix dactylifera (date palm): 103697015
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Entry
103697015 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
103697015
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pda01007
]
103697015
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pda03016
]
103697015
Enzymes [BR:
pda01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
103697015
Amino acid related enzymes [BR:
pda01007
]
Aminoacyl-tRNA synthetase
Class I (U)
103697015
Transfer RNA biogenesis [BR:
pda03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
103697015
Prokaryotic type
Other AARSs
103697015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
103697015
NCBI-ProteinID:
XP_038980573
UniProt:
A0A8B9A9J5
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All DBs
Position
3:complement(12754276..12794717)
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AA seq
1187 aa
AA seq
DB search
MDDVCEGKEFSFPRQEERILQWWKEVAAFETQLKRTESMPEYIFYDGPPFATGLPHYGHI
LAGTIKDVVTRYQSMAGHHVTRRFGWDCHGLPVEFEIDTKLGIRSRDDVLAMGIDKYNEE
CRSIVTRYVKEWEEIITRTGRWIDFKNDYKTMDPWFMESVWWVFKQLHDKDLVYRGFKVM
PYSSGCKTPLSNFEAGLNYKDVPDPAIMVSFPIVGDPDNAALVAWTTTPWTLPSNLALCV
NANFVYVKVRDKFSGTVYIVAESRLSELPKRKSKADGLVASMQDLTLSNSKSKGTKDAKV
KSEPDTGSYELLGKIAGSSLVKFXCRYKPLFDYFLEFSETAFQVVADNYVTDDSGTGVVH
CAPAFGEDDYRVCVASGIIQKDEDRIVAVDADGCFTEKVSDFHGHYVKDADKDIINVVKG
KGRLVSIGSITHAYPFCWRSDTPLLYRAVPSWFVAVEKIKEQLLESNKQTYWVPEYVKEK
RFHNWLENARDWAVSRSRFWGTPLPVWISEDGKEKVVIGSIGELEEKSGVKVTDLHRHFI
DHITIPDSRGPKYGVLRRVEDVFDCWFESGSMPYAYIHYPFENAELFENNFPGHFVAEGL
DQTRGWFYTLMVLSTALFGKPAFRNLICNGLVLAEDGKKMSKRLKNYPSPMEVIGDYGAD
ALRLYLINSPVVRAEPLRFKKDGVYGVVKDVFLPWYNAYRFLVQNAKRLEVEGFEPFIPI
DYNTLQKSSNVLDQWINSATESLVHFVRQEMDAYRLYTVVPYLLKFIDNLTNIYVRFNRK
RLKGRTGEEDGRISLSTLHHVLLTTCKAMAPFTPFFTEVLYQNLRKVSVGSEESIHYCSF
PSTRGKREERIEQSVTRMMTVIDLARNIRERHNKPLKTPLKEMVVVHPDSDFLEDIAGKL
RAYVMEELNIKSVVPCNDPLKYASLRAEPDYSVLGKRLGKAMGTVAKEVKAMSQADILAF
ERSGEVTFSGHCLKLTDIKIVREFKCPANVKEKEIDASGDGDVLVVLDLQADESLFEAGV
AREVVNRVQKLRKKAGLELTDIVEVYYKPLDNDKNILENVVNSQEQYIREALGSPLLHHS
WTPSDAVIFCQEEFRGVSGASFVISFAKPTLVFDSDAILALFSGNKKHADALQIYLSSRD
LFNLKLEFQVGNGKIKIDCVKDQPAVDLELGKHIFLSVGDYFLSRKQ
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtctgcgaggggaaggagttctccttccctcgccaggaggagcgcattctc
caatggtggaaggaagtcgccgccttcgagacccagctaaagcgcaccgagtccatgccc
gagtacatcttctacgatggcccccccttcgccaccggcctcccccactacggccacatt
ctcgctggcaccatcaaggacgtcgtcacccgctatcagtccatggccggccaccacgta
acccgccgcttcggctgggactgccacggcctccccgtcgagttcgagatcgacaccaag
ctcggcatccgctcccgcgacgacgtcctcgccatgggcatcgataaatataacgaggag
tgccgcagcatcgtcaccaggtacgtcaaagagtgggaggagatcatcacaaggaccggg
cggtggatcgacttcaagaatgattacaagaccatggatccgtggttcatggagagcgtc
tggtgggtctttaaacagcttcatgataaggatctcgtctaccgagggttcaaagttatg
ccctacagcagtggctgcaagactccgctttcgaattttgaagctggtttgaactacaag
gatgtgccggaccctgctatcatggtgtcatttcctatagttggtgatccagacaatgcg
gctctagttgcatggacgacgactccatggacgcttcccagcaatcttgctctctgtgtc
aatgccaattttgtttatgtgaaggttcgtgacaagttttccgggacagtctatattgtt
gcggagtctcgattatcagagttgcccaaaaggaaatcaaaagcagacggactagttgca
tccatgcaagatttaaccctctcaaactctaagagtaaaggaaccaaggatgctaaagtt
aagagtgaaccagatactgggtcatatgaattgcttgggaaaattgcaggctcttccctg
gtgaaattttaatgcagatataagccactgtttgattatttcttagagttttcagaaaca
gcattccaggtggttgcagacaattatgtcactgatgatagtggaactggtgttgtccat
tgtgctcctgcatttggtgaagatgattatcgtgtttgcgttgcttcgggtataattcaa
aaggatgaagatcgtattgtggcagttgatgccgatggttgctttactgagaaggtttct
gacttccatgggcactatgtcaaggatgctgataaggatatcataaatgtggttaagggg
aaaggaagacttgtgagtatagggagtatcacacatgcatatcctttctgctggagatcg
gacactcctctcctttacagggctgttccaagttggtttgttgctgttgaaaagatcaaa
gagcagctgctagagagtaacaaacagacatactgggttcctgaatatgtcaaggaaaaa
cgctttcataattggctggaaaatgctagagattgggctgttagtagaagtagattctgg
ggtactcctcttcctgtatggataagtgaggatggtaaagagaaagttgttattggttcc
attggtgaacttgaagagaagtctggtgttaaggttacagatcttcatcgtcactttatt
gaccatattacaattcctgatagtcgtggtccaaagtatggtgtgcttcgccgtgtcgag
gatgtatttgattgctggtttgagagtgggtccatgccgtatgcttatattcattaccca
tttgagaatgctgaactctttgaaaataattttccaggacattttgtggccgagggcctc
gaccagactcgtggatggttctatactctcatggtattgtctactgcattgtttggaaaa
cctgcatttaggaatctaatatgcaatggtcttgtccttgctgaggacgggaagaaaatg
agcaaaaggttgaagaattatccctcgcctatggaagtcataggtgattatggagcggat
gctctgcgattatacctcataaattcaccagttgtgcgtgcagaacctttgaggttcaaa
aaagatggcgtatatggtgttgtgaaagatgtcttccttccgtggtataatgcatataga
tttcttgttcaaaatgcaaaaagactggaagttgagggttttgaaccatttattcctatt
gattataatactcttcaaaaatcttcaaatgtgcttgaccagtggatcaactctgctact
gaaagtcttgttcactttgtccgccaagagatggatgcatatcggttgtacacggttgta
ccatatcttctaaaatttatcgataatcttacaaatatatatgtgcgttttaaccgtaag
aggctaaaagggcgtactggagaggaggatggcaggatttcactttccactcttcatcat
gtgcttttaactacttgtaaagcaatggctccatttacaccattcttcactgaggttctt
tatcaaaatttgcgcaaggtttctgtcggatccgaggaaagcattcattactgtagtttc
ccttcaacaagagggaagagagaggaacgcattgaacaaagtgttacaaggatgatgact
gtcatcgatcttgcccgtaacattcgggagcgtcataacaagcctcttaaaacaccactc
aaagagatggtggttgttcatcctgacagtgactttcttgaagacatcgcagggaaacta
agagcgtatgtgatggaagaactcaatataaaatcagtggtcccatgcaatgatcctttg
aaatatgcttctttacgtgcggagcctgattacagtgtacttggtaaacgacttggaaaa
gccatgggaactgttgccaaggaggttaaggcaatgtcacaggccgacatcttagcattt
gaaagatctggagaagttaccttctctgggcactgtttgaagttgactgatatcaagata
gtgagggaattcaagtgtcctgccaatgtaaaggagaaagaaatagatgcttctggcgat
ggtgatgttttggttgtattggatttacaagctgacgagtcattgtttgaggcaggggtt
gctcgcgaggttgttaacagagtccagaagttacgaaagaaagctggactggaactgact
gatattgtggaggtttactacaaacctctagacaatgacaaaaatattctggagaatgtt
gtaaactcacaggagcaatacattagggaagcattgggttctcctttacttcatcattct
tggactccatcagatgctgtcatattttgccaggaagaatttcgtggggtatctggggca
tcgtttgtcatcagctttgcaaagcctactctggtgtttgattctgatgctattcttgca
ttattttcaggaaacaaaaagcatgctgatgctttacagatatatctatcatcaagggat
cttttcaatttgaagttggagtttcaagtcgggaatggaaagatcaagatagattgtgtg
aaggatcagccagcagttgatttggaattgggaaaacatatctttttgagcgttggggat
tacttcttgagcagaaaacagtaa
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