Phoenix dactylifera (date palm): 103704418
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Entry
103704418 CDS
T03274
Name
(RefSeq) sm-like protein LSM3B
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103704418
09123 Folding, sorting and degradation
03018 RNA degradation
103704418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103704418
03041 Spliceosome [BR:
pda03041
]
103704418
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103704418
mRNA degradation factors
5'-3' decay
Lsm complex
103704418
Spliceosome [BR:
pda03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
103704418
Complex C
U2 snRNP components
103704418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
103704418
NCBI-ProteinID:
XP_038987682
UniProt:
A0A8B9AQ49
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Position
1:complement(31025525..31031363)
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AA seq
97 aa
AA seq
DB search
MASEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIITTVE
IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaagaggagagcacggtgaaggagcctcttgatctcataaggctcagcctg
gatgagcgcatctatgtgaagctccgctccgaccgagagctccgaggaaaactccacgct
tatgatcagcatctaaatatgatacttggagatgtggaagagataatcactactgtagaa
attgatgatgaaacttacgaagagattgttcggactactagacgcactgttccatttctt
ttcgtcagaggagatggagtaatactggtttctcctcctctgagaacagcatga
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