KEGG   Phoenix dactylifera (date palm): 103704418
Entry
103704418         CDS       T03274                                 
Name
(RefSeq) sm-like protein LSM3B
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03018  RNA degradation
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103704418
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103704418
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103704418
   03041 Spliceosome [BR:pda03041]
    103704418
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103704418
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     103704418
Spliceosome [BR:pda03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    103704418
 Complex C
  U2 snRNP components
    103704418
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin
Other DBs
NCBI-GeneID: 103704418
NCBI-ProteinID: XP_038987682
UniProt: A0A8B9AQ49
LinkDB
Position
1:complement(31025525..31031363)
AA seq 97 aa
MASEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIITTVE
IDDETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggcgagcgaagaggagagcacggtgaaggagcctcttgatctcataaggctcagcctg
gatgagcgcatctatgtgaagctccgctccgaccgagagctccgaggaaaactccacgct
tatgatcagcatctaaatatgatacttggagatgtggaagagataatcactactgtagaa
attgatgatgaaacttacgaagagattgttcggactactagacgcactgttccatttctt
ttcgtcagaggagatggagtaatactggtttctcctcctctgagaacagcatga

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