Phoenix dactylifera (date palm): 103709141
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Entry
103709141 CDS
T03274
Name
(RefSeq) DNA polymerase kappa isoform X1
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
103709141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103709141
Enzymes [BR:
pda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103709141
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
103709141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
IMS_HHH
RAC_head
Motif
Other DBs
NCBI-GeneID:
103709141
NCBI-ProteinID:
XP_038970283
UniProt:
A0A8B8Z8A9
LinkDB
All DBs
Position
16:6752540..6773545
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AA seq
658 aa
AA seq
DB search
MGTTSDGDRPWQSYHTAYTNAKAGMEGVDKEKVQRIIYEMSKGSKYFENEKRKEAYIRQK
VENLHTLCAKLTDKDMPHFQEVANKKILELEASRDLSKIWLHIDMDAFYAAVETLENPSL
KGKPMAVGSMSMICTANYEARKFGVRAAMPGFIAHKLCPDLVFVPTNFEKYTYYSELTRK
VFRRYDPDFIAASLDEAYLNITESCNERGLSSEEVAAELRNNIYEETGLTCSVGVAPNRL
LAKVCSDINKPNGQYILPNDRKAVTTFISSLPIRKIGGIGKVTETILKDVLGINTCEELL
QKGAFLCALFSHCSTDFFLSVGLGLGRTDTPEQKLRKSISSERTFSATGDEPMLLQKLAD
IAETLSNDMQKECLWGRTLTLKLKTASFEVRTRAVSLQKFIQSKEEIQTYASKVLKAELP
LSLRLMGLRMSQFRDDKCSPRDPMQKTLASFVISGNVTASATCVNKSSISEFSDEHQICD
AQTDLSVHRESSASNDNKISLSYETNDVLASNQLSCGLKFASTSNADGIENMGNGCSEKC
DSVETKNEMISNFSGHKTVAASSQKVELSWVDGYICSVCGIEMPPSFIEERQEHSDYHLA
EMLQEEESVYGTGHLTQERSVRKALQAKENARKKLKSSPNKGRHIPIDAFFIKGKKNL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggggacgacctccgatggagatcggccgtggcagtcctatcacacggcctacaccaac
gccaaagcaggaatggagggagttgacaaagagaaagtgcagaggatcatatatgagatg
agtaaaggatcaaaatatttcgagaatgagaaacgtaaggaggcatatattagacaaaaa
gtagagaatttgcatactctgtgtgcaaaactgacagataaggacatgccccattttcag
gaggtggctaataaaaaaattttggagctggaagcttcacgtgacctttcaaagatatgg
ctgcacattgacatggatgctttctatgctgctgttgagacattagagaatccatctttg
aagggaaaacctatggcagtaggtagcatgtctatgatatgcactgcaaattatgaggca
cggaaatttggggttcgtgctgcgatgcctggtttcattgcacataaattatgtccagac
ttggtttttgttcctaccaatttcgagaaatatacttattacagtgaactaacaagaaaa
gttttcagaagatatgaccctgacttcatcgcagctagtttggatgaagcatacctaaat
ataactgaatcctgcaatgaaagaggtcttagcagtgaagaagttgctgctgaactcagg
aataatatttatgaggagactggtctcacatgtagtgttggagtggcgcctaaccgcttg
cttgccaaggtttgttcagatattaacaaacctaatgggcaatacatcttaccaaatgac
cggaaggctgtgacgacctttatatcttcactacctataagaaagatagggggaattggt
aaggtgactgaaaccattttaaaggatgtacttggaatcaacacttgtgaggagttgctg
caaaagggtgcattcctgtgtgcgctgttttctcattgttcaactgacttttttctttca
gttggacttggcttaggaagaacagatactcctgaacaaaagttgcgtaagagtattagc
agtgagagaacattttctgccactggagatgaaccaatgcttttacagaaattggcggat
attgcagaaacattatcaaatgacatgcagaaggaatgtctttggggacgaactttgaca
ctaaaattgaagacagcatcttttgaggttagaactagagcagtatcactgcagaaattt
attcaatcaaaggaggaaatccaaacttatgcttccaaggtgttaaaggcagaacttcct
ctttctttgaggttgatgggcctgcgcatgtcacagtttcgtgatgacaaatgcagtcct
cgtgatcccatgcagaagacccttgcaagttttgtcatctcaggaaatgttacagcaagt
gctacatgtgtcaacaaatcaagtatttctgagttcagtgatgagcatcaaatatgtgat
gcacaaactgatctttcagttcatcgtgagagctctgcctcaaatgataataaaatctct
ctttcatatgaaacaaatgatgtacttgcatccaaccagctgtcttgtggactcaagttt
gcctccaccagtaatgcagatggaatagaaaatatgggtaatgggtgctcagagaagtgt
gatagtgtagagacaaaaaatgagatgattagcaacttctctggccataaaacagtagct
gcatccagtcaaaaggtagaactttcatgggtagatggctatatttgctctgtttgtggg
attgaaatgcctccaagtttcatcgaggagaggcaagaacattcagattatcatctagct
gagatgcttcaggaggaggaatctgtgtatggcacaggacaccttacacaggagaggtca
gtgcgaaaggcactgcaagctaaagaaaatgctcggaagaagctgaagtcttccccaaac
aagggaaggcatatccccattgatgccttctttatcaagggcaagaaaaatttgtag
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