Phoenix dactylifera (date palm): 103711519
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Entry
103711519 CDS
T03274
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03420
Nucleotide excision repair
pda04120
Ubiquitin mediated proteolysis
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103711519
04120 Ubiquitin mediated proteolysis
103711519
09124 Replication and repair
03420 Nucleotide excision repair
103711519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103711519
03400 DNA repair and recombination proteins [BR:
pda03400
]
103711519
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
103711519
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
103711519
Multi subunit type E3
SCF complex
Ring finger protein
103711519
Cul2 complex
103711519
Cul3 complex
103711519
Cul4 complex
103711519
Cul7 complex
103711519
Cul8 complex
103711519
Cul9 complex
103711519
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103711519
TCR (transcription coupled repair) factors
Cul4-CSA complex
103711519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
DUF4644
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
103711519
NCBI-ProteinID:
XP_008795912
UniProt:
A0A8B9B3D8
LinkDB
All DBs
Position
15:11445223..11454420
Genome browser
AA seq
119 aa
AA seq
DB search
MASLDTDINMVPAGEGSSGAAGPSSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHI
MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctggacacggacatcaacatggttcctgccggcgagggatcgagcggcgcc
gccgggccgtcgtcgtcctccaagaagccgaagcgcttcgagatcaagaagtggaacgcc
gtcgccctctgggcctgggatatcgtcgtggataactgcgctatttgcaggaaccacatc
atggatctctgcatcgagtgccaggcgaaccaagccagtgcgactagcgaagaatgcacc
gttgcttggggtgtctgcaatcatgcttttcacttccactgcatcagtcggtggctcaag
actcgtcaagtttgccctttggacaacagtgagtgggagttccagaaatatggccactaa
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