KEGG T03274: 103714486

Phoenix dactylifera (date palm): 103714486

Entry

103714486         CDS       T03274

Name

(RefSeq) endonuclease III homolog 1, chloroplastic isoform X2

K10773

endonuclease III [EC:3.2.2.- 4.2.99.18]

Organism

pda Phoenix dactylifera (date palm)

Pathway

pda03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:pda00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103714486
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pda03400]
    103714486
Enzymes [BR:pda01000]
4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     103714486
DNA repair and recombination proteins [BR:pda03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     103714486
Prokaryotic type
     103714486

SSDB

Motif

Pfam:

HhH-GPD HHH HHH_5 Cdd1 HHH_8 RecR_HhH

Other DBs

NCBI-GeneID:

103714486

NCBI-ProteinID:

XP_008799977

UniProt:

A0A8B7CIN2

LinkDB

Position

14:11693599..11700681

AA seq 424 aa
MGNNNKKIKKNKERKQTKIPPFYFQVNPSSLQIQMPFSLAVLRVPLLSFSSPAKNLRMSR
TRLSSRSLPSEAQNPNPELNPGSDGIAGLGIRGYAGKKRVKRMIEINAENPEGEARDQKI
DHLPDIEEFAYNKAKATKTSSKVKLASALPVGMDKRTDLSIVPKVEPPTNWEEVLEGIKK
MRSSEEAPVDSKGCEKAGILLPPKERRFAVLVSSLLSSQTKDAVTHGAVQRLTEKGLLDA
DAIVKTDEASMASLIYPVGFYLRKAHYIKKVAEICLEKYDGDIPSSLDELLALPGIGPKM
AHLVMNVGWNNVQGICVDTHVHRICNRLGWVSRPGTRKKTLTPEETRVSLQTWLPKDEWV
LINPLLNRSCCSIFSDVKYEAGTSAFGWIRANNLHSSQTSVRNLWYKQIMPICFHGDGKP
QFKS

NT seq 1275 nt +upstreamnt +downstreamnt
atgggaaacaacaacaaaaaaataaaaaaaaataaagaaaggaaacaaacaaagatccct
cctttttacttccaagtaaacccatcttccctccaaatccaaatgcccttctctctcgcc
gtcttaagggtccctcttctctcgttctcttctcccgcgaaaaacctgaggatgtctcgg
accaggctctcttcccgatctcttccatcagaggcccaaaaccctaacccagagctaaat
ccaggttctgatggcattgctggattggggattcgtggttatgcgggaaaaaagagggtc
aaaaggatgatcgaaattaatgcggagaatccagaaggagaagctcgtgatcagaaaatt
gatcacttgcctgacattgaagagtttgcatataataaggccaaggcaactaaaacttca
agtaaggtgaagcttgcatctgctcttccagttggtatggacaagaggacagacctttcc
atagtaccaaaagtggaaccaccaacaaattgggaagaagtccttgaagggattaagaaa
atgaggtcctctgaggaggccccagtagactccaagggatgtgaaaaggcgggtattctt
ctaccaccaaaggaaagaagatttgcagttttggtttcttcccttctatcgagccaaacc
aaggatgcagttacacatggtgccgtgcagcgtctcactgagaaaggcttacttgatgct
gatgccattgttaaaactgacgaagcaagcatggctagtttgatctatccggttggattt
tacctgagaaaggctcattacataaagaaagttgctgaaatttgtcttgaaaagtatgat
ggagacatcccaagttctttagatgaactgttagcgcttccaggcataggtccgaaaatg
gcacatctggttatgaacgtcggatggaataatgttcaagggatttgtgtcgatactcat
gtgcatcgaatttgtaatcgccttggatgggtatcacgaccgggaacaagaaagaaaact
ttgactccagaagagacaagagtgtctttgcaaacatggcttccgaaggatgaatgggtt
ctgatcaatccactactgaaccgatcgtgttgtagcatcttttctgatgtgaaatatgaa
gcaggcacttcagctttcggttggattcgggcaaacaatttgcactcctctcagacctcg
gtgcggaatctgtggtataaacaaattatgcccatctgctttcatggagacggcaagccc
cagttcaaaagctaa

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