Phoenix dactylifera (date palm): 103717783
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Entry
103717783 CDS
T03274
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103717783
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
103717783
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
ResIII
zf-RING_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
103717783
NCBI-ProteinID:
XP_038981944
UniProt:
A0A8B9AFC6
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Position
4:complement(26245856..26258722)
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AA seq
864 aa
AA seq
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MPRRRRDPRNGGKRRMKAPDFSDHESFSTSDSDFVIDLDDEEFEDEEEAEPLPPPPPPAA
AAVGEIGGVGSDRRRKGKSSSRKSRVRKDKGKSPLIWEMWEKDNEKWVDDSVAEEFDLER
PLAETAEPSADIVLPLLRFQKEWLAWALKQEESEFRGGVLADEMGMGKTIQAISLVLTAR
SLSTRIVGGATSSDMGSCSISPLPRTKCTLVICPVVAVIQWVGEIERYTKKGTARVLVYH
GAKRSNTDYDFNNYDFVLTTYSTIESDYRKHMMPPKLKCQYCDKSFYPHKMKVHLKYYCG
PYAQKTEKQSKQVSKKKKYSSVDDEKGKGKKKGGHNREKQEEFLSSSEDEKGKRKNKRDS
KTRKQEKPSENTLGSSEGKSVLHSWKWQRIILDEAHFIKDRRCNTAKAVFALESLYKWAL
SGTPLQNRVGELYSLVRFLQIHPYSYYFCRDCNCKILDYRSSTCTECPHSSTRHFCWWNK
NITKPIQNLSTFDEGRRAMILLRDRVLKNIVLRRTKKGRAADLALPPRLVTLRRDTLDRN
EQEFYEALYTQSCVQFDTYVSAGTLMNNYAHIFDLLTRLRQAVDHPYLVIYSKTTEMPDG
SKDDTVKDNCGICHDPAEDLVVTSCEHVFCKACLIDYSSALGNVSCPTCSKPLTVDLTTK
NSAEKLSRTAIKGYKHSGILNRLNDIGDFKSSTKIDALMEEIRDMVENDGSAKGIVFSQF
TSFLDLIGFSLQRSGIKCVQLVGSMSIPEREKAIKSFTDDVDCKIFLMSLKAGGVALNLT
VASYVFLMDPWWNPAVERQAQDRIHRIGQYKPIRTVRFVIEDTIEERILKLQEKKELVFE
GTIGNSSAAMGKLTEADLRLLFHI
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaggcgccgagaccctagaaatggggggaagcggcgaatgaaggccccagac
ttctccgatcatgaatccttctccacttcggattctgatttcgtcatcgatttggacgac
gaggagttcgaagacgaggaggaagcagaaccgttgccgccgccgccgccgccggcggcg
gcggcggttggagaaattggtggtgttggaagcgatcgacgaaggaagggaaagtcctct
agtaggaagagcagggttaggaaggacaaggggaaatcccctttgatttgggagatgtgg
gagaaggacaatgagaagtgggtggacgattccgtggcggaagaattcgatcttgagcgg
ccgttggcagagacggcggagccgtccgcggacatcgtccttcccctccttaggttccag
aaggagtggcttgcctgggctttgaagcaggaggagtctgagttcagagggggggttctt
gccgatgagatgggtatgggcaagaccatccaggccatttccctcgtcctcactgcccgc
tctctcagcacgcgtattgtcggtggggccacaagttctgatatgggctcttgctcgatc
tctccgctcccgaggaccaaatgcacccttgtcatctgccctgtggttgcggtgatccaa
tgggtgggggagatcgagaggtacacaaagaaagggaccgccagggtgctggtctatcat
ggggcaaaaagatccaacactgattatgatttcaacaactatgatttcgtactgacaacc
tactcgacgattgagtctgactataggaaacatatgatgccgccgaagttgaagtgccaa
tattgcgataagtcattctaccctcacaagatgaaggttcacttgaagtactactgtggg
ccttatgctcagaagacagaaaaacaatcaaagcaagtgagcaagaagaagaagtattca
tctgtggatgatgaaaaaggtaaagggaagaagaagggaggtcataatagagagaagcaa
gaggaatttctgtctagctcagaagatgagaagggtaaaaggaagaacaagagagattcg
aagactaggaagcaagagaagccatctgaaaatacattaggctcatccgaaggaaaatca
gttctgcattcttggaagtggcaacgtattattttggatgaggctcatttcataaaagac
agacgctgcaatactgcaaaagctgtttttgctttagaatctctatataagtgggcatta
agtggcactcctctacaaaatcgagttggagaactttactcgctggttcgctttttgcaa
attcatccttattcatattatttctgcagggattgtaattgtaagattcttgattatcgt
tcaagcacatgcactgagtgtcctcattcttccacaaggcacttttgctggtggaacaaa
aatataaccaagcccatacaaaatttatcgacatttgatgagggcagaagagccatgatt
ttgcttagggacagagttctgaaaaacatagtgctaaggcgtacaaagaaaggcagagct
gcggatcttgcacttccaccaagacttgttaccttgaggagagatactctggatagaaat
gaacaggagttctatgaagcattatatactcaaagctgtgtacagtttgatacatatgtt
tcagctggaactctgatgaacaattatgcacacatttttgatctccttacacgattgcgg
caggcagttgaccatccatacctggtgatatattctaaaactactgaaatgcctgatgga
agcaaagatgatactgtgaaagacaattgtggtatttgtcatgatccagcagaagatctg
gtggttacctcttgcgagcatgtattttgtaaggcatgtttgattgattactcttcagct
ctggggaatgtatcatgtccaacatgttctaaaccccttactgttgacttaacaacaaag
aactctgccgaaaagttgtctcgaacagccatcaagggttataagcactcgggaatatta
aacagacttaatgatattggagactttaagtcaagtacaaaaattgatgccctgatggaa
gagataagagacatggttgaaaatgatggttctgcaaaaggaatcgttttcagccagttt
acatcatttttggatttgattggtttctccctccaaaggtctggcattaagtgtgttcag
ttggtgggaagcatgagtattcctgagagagagaaagctataaagtcattcaccgatgat
gtggattgcaagatttttctcatgagcttgaaagctggaggggtggccctcaatctcact
gtggcatcatatgttttcttgatggatccgtggtggaacccagcagtggagcgccaggct
caagatcgaattcaccgaatcgggcaatataagcccatcagaactgtgagatttgtgatt
gaggacaccatcgaggaacggatactgaagttgcaagagaagaaggagctagtgtttgaa
gggaccataggtaactcttctgctgctatgggaaagctaacagaagcagacttgcggctt
ttattccacatttga
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