Phoenix dactylifera (date palm): 120113304
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Entry
120113304 CDS
T03274
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03420
Nucleotide excision repair
pda04120
Ubiquitin mediated proteolysis
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120113304
04120 Ubiquitin mediated proteolysis
120113304
09124 Replication and repair
03420 Nucleotide excision repair
120113304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
120113304
03400 DNA repair and recombination proteins [BR:
pda03400
]
120113304
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
120113304
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
120113304
Multi subunit type E3
SCF complex
Ring finger protein
120113304
Cul2 complex
120113304
Cul3 complex
120113304
Cul4 complex
120113304
Cul7 complex
120113304
Cul8 complex
120113304
Cul9 complex
120113304
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120113304
TCR (transcription coupled repair) factors
Cul4-CSA complex
120113304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
DUF4644
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
120113304
NCBI-ProteinID:
XP_038990339
UniProt:
A0A8B9B3D8
LinkDB
All DBs
Position
15:complement(10631768..10639881)
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AA seq
119 aa
AA seq
DB search
MASLDTDINMVPAGEGSSGAAGPSSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHI
MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctggacacggacatcaacatggttcctgccggcgagggatcgagcggcgcc
gccgggccgtcgtcgtcctccaagaagccgaagcgcttcgagatcaagaagtggaacgcc
gtcgccctctgggcctgggatatcgtcgtggataactgcgctatttgcaggaaccacatc
atggatctctgcatcgagtgccaggcgaaccaagccagtgcgactagcgaagaatgcacc
gttgcttggggtgtctgcaatcatgcttttcacttccactgcatcagtcggtggctcaag
actcgtcaagtttgccctttggacaacagtgagtgggagttccagaaatatggccactaa
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