KEGG   Phoenix dactylifera (date palm): 120113304
Entry
120113304         CDS       T03274                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03420  Nucleotide excision repair
pda04120  Ubiquitin mediated proteolysis
pda04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120113304
   04120 Ubiquitin mediated proteolysis
    120113304
  09124 Replication and repair
   03420 Nucleotide excision repair
    120113304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pda04121]
    120113304
   03400 DNA repair and recombination proteins [BR:pda03400]
    120113304
Enzymes [BR:pda01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     120113304
Ubiquitin system [BR:pda04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   120113304
  Multi subunit type E3
   SCF complex
    Ring finger protein
     120113304
   Cul2 complex
     120113304
   Cul3 complex
     120113304
   Cul4 complex
     120113304
   Cul7 complex
     120113304
   Cul8 complex
     120113304
   Cul9 complex
     120113304
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120113304
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120113304
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 DUF4644 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 120113304
NCBI-ProteinID: XP_038990339
UniProt: A0A8B9B3D8
LinkDB
Position
15:complement(10631768..10639881)
AA seq 119 aa
MASLDTDINMVPAGEGSSGAAGPSSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHI
MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 360 nt   +upstreamnt  +downstreamnt
atggcgtcgctggacacggacatcaacatggttcctgccggcgagggatcgagcggcgcc
gccgggccgtcgtcgtcctccaagaagccgaagcgcttcgagatcaagaagtggaacgcc
gtcgccctctgggcctgggatatcgtcgtggataactgcgctatttgcaggaaccacatc
atggatctctgcatcgagtgccaggcgaaccaagccagtgcgactagcgaagaatgcacc
gttgcttggggtgtctgcaatcatgcttttcacttccactgcatcagtcggtggctcaag
actcgtcaagtttgccctttggacaacagtgagtgggagttccagaaatatggccactaa

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