Paramisgurnus dabryanus (large-scale loach): 135720535
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Entry
135720535 CDS
T10799
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135720535 (scn4aa)
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
135720535 (scn4aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
ATP-synt_B
IQ
Lustrin_cystein
GPHH
Motif
Other DBs
NCBI-GeneID:
135720535
NCBI-ProteinID:
XP_065098776
LinkDB
All DBs
Position
1:60664263..60692221
Genome browser
AA seq
1823 aa
AA seq
DB search
MANLLPRTGVSAFRRFTPESLAEIERLIQEKSGREEVDGDEEEPQVPTSDLEAGKNLPMI
YGDPPDEFLNTPLEDIDPFYNAQKTFIVISKGNTIFRFSAEPALYFISPFNPVRRGAIKI
LIHSVFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEASIKVVSRGFCIGPFT
FLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSV
KKMVNVMILTVFALAVFALIGLQLFMGNLRQKCIRWPIANSTVFNDVYNFTMTNDTSLNH
NETLDFNAYINNEGNQYFLDGSLDALLCGNSSDSGKCPEGYTCMKAGRNPNYGYTSYDNF
GWAFLALFRLMTQDYWENLFQLTLRAAGKAYMIFFVVVIFLGSFYLINLILAVVAMAYDE
QNEATITEAREKEEKFQRLLEQLRNQEQEAGSKTSLASQTTRSRGSNRTGSLQSLRGADV
IIKDCNGKIIPQVNSVHPDREISAEDEHRSVSIQDEDQWKLSKRATSAVSVLTGNMEDIE
DAQRPCPPGWYKFADIFLKWDCCPPWLIFKKWVHFIVMDPFADLGITICIVLNTLFMAME
HYPMSEDFEHVLSVGNLIFTGIFTAEMVLKLIALDPYYYFQVGWNIFDSIIVTLSLVELG
LANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISEDCVLPRWHMTDFFHSFLIVFRILCGEWIETMWDCMEVAGAGMC
LVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSAPEEDGEMNNLQIAIARITRALDWLKA
FIARKMLQILGKKPPDVKEEEGEKDTELYSINHLQKETMTDAQTNCLTSTVPIAHCESDV
EEEDEEEEESSDEDDRKVGLDDDLSVCSTADYQPPEPEPEPEEEEEPEPEEPQPCFTEGC
IRRCPWLNVDTTEGWGKRWWNLRRTCFTIVEHDYFETFIIFMILLSSGALAFEDINIERR
RVIKIVLEFADKVFTYIFILEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSIVSLTANLLG
YSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMG
VNLFAGKFYHCINTTSEERFPMDVVNNKSDCMNLMYTNEARWVNIKVNYDNVGMGYLSLL
QIATFKGWMDIMYAAVDSREVEEQPSYEINLYMYLYFVIFIIFGSFFTLNLFIGVIIDNF
NQQKAKFGGKDIFMTEEQKKYYNAMKKLGNKKPAKPIPRPTNKIQGLVFDLISQQFFDIF
IMVLICLNMVTMMVETDDQSQEKEDILYLINLIFVVVFTGECTLKLLALRQYFFTNGWNV
FDFVVVILSIAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMS
LPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQAGIDDLFNFETFGSSIICLFEITTSAGW
DGLLLPIMNSGPPDCDPNAENPGTEVKGNCGSPAIGIVFFSSYIIMSFLVVVNMYIAIIL
ENFNVAQEESSDLLCEDDFEMFNETWERYDLEATQFIDYDHLFDFADALLEPLRVAKPNR
LKLIAMDLPVVTGDKIHCLDILSAVTREVLGDTIEMVAMQSSIETKFKTNNPTSASFAPI
VTTVRRKEEERAAVIIQQTYRRHLLRRAVRHACFMHRSKSEIRSQEDEEAPETEGLIARK
MGSLYGSNPELAMALELRVRPMPADAERLPRTTSVVQHGSTATYPRPQGQLVVPVELTSE
AVLRSVPTSVRASEKLNIKESVV
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacctgctccctcgcacaggagtcagcgcgttccgtcgcttcacaccggagtcg
ctggcagagatcgaaaggctcatccaggagaagagtggcagggaagaagtagatggagat
gaggaggaaccacaggtgcccaccagtgacctggaggcagggaagaacctccccatgatt
tatggtgacccaccagacgagttcctcaacacccctttggaggacattgaccctttctac
aatgcacagaaaacgtttattgtcataagcaaaggaaacacaatcttcaggttttctgct
gaaccagcactttactttatcagtccatttaatcccgtcagaagaggagccatcaaaatt
ctcatacattcagttttcagtatgttcattatgatcaccatcctgtccaactgtgtcttc
atgaccatgagtaatcctccagcctggagtaaaactgtggaatatgtctttactggtatc
tacacctttgaagcatccatcaaagttgtgtcgcgaggtttttgcattggaccttttaca
ttcctccgtgacccgtggaactggctcgatttcatggtcatcagcatggcgtacatcaca
gagtttgtagatcttggtaatgtatcagcactgagaacctttcgtgtgcttcgagctctc
aaaaccatcactgttattcctggtttaaaaaccatcgtgggggctctgatccagtctgtg
aagaagatggtgaacgtgatgattctcaccgtctttgcgttggccgttttcgcactcatc
gggctgcagttgttcatgggcaatctacgacaaaagtgcattcgctggccgatcgccaac
agcaccgtctttaatgatgtctacaactttaccatgaccaatgacaccagcctcaaccac
aatgagactttagattttaacgcttacataaacaatgaaggtaaccaatactttctagat
ggaagtttagatgctttattgtgtggtaacagctctgactctgggaagtgtccagaagga
tacacgtgtatgaaggccggcaggaacccaaactacggctacaccagctacgacaacttc
ggctgggcatttctggctctctttagactcatgacccaggactattgggagaatctcttt
cagctgactcttcgtgctgctggaaaggcctacatgatcttctttgttgtggtcatcttc
ctgggctctttctacctcatcaatctgatcttggctgttgtcgccatggcttacgatgag
cagaacgaagccacgattactgaagctcgtgagaaagaagagaagtttcagaggttgctg
gagcagctcaggaaccaagagcaagaggcaggcagtaaaacatctttggccagccagacg
acacgaagtcgaggttcaaacaggacaggttcactacagagtcttcgaggtgctgacgtc
atcataaaggactgcaatggcaaaataattcctcaagtcaacagtgtccatcctgacaga
gagatatcggctgaagatgagcacaggtctgtgagtatacaggatgaagatcagtggaaa
ctctctaaaagagcaaccagtgctgtcagtgtactcacggggaacatggaagatatagaa
gatgctcagaggccttgtcctcctggctggtataagtttgctgacattttccttaaatgg
gactgctgccctccatggctcatctttaaaaagtgggtccattttatagtgatggacccg
tttgccgatctaggtatcaccatctgcattgtgctcaacacgcttttcatggccatggag
cactacccaatgagtgaggatttcgaacacgttctgtcagtgggcaacttgatatttaca
ggaatcttcacggcagaaatggtcctcaagcttattgcactggacccttactattacttt
caggtgggctggaacatttttgacagcatcatcgtcacgctcagtctggtggagttagga
ctggccaatgttcagggtctctctgttctccggtcctttcgtttgctgcgtgtcttcaag
ctggctaaatcttggcccacccttaacatgctgatcaagatcatcggtaactcggtgggt
gctctggggaacttgactctcgtcctggccatcatcgtctttattttcgccgtggtgggc
atgcagctgtttggcaagagctacaaggagtgcgtgtgtaagatctctgaggactgcgta
ctgcctcgctggcacatgaccgacttcttccactcgtttctcattgtcttccgaatcctg
tgtggagagtggattgagaccatgtgggactgcatggaggtcgctggagccgggatgtgt
ttggtggtcttcatgatggtcatggtcattggtaacctggtggtgttaaatctcttcttg
gccctgctgttgagctcattcagcggagataacctgtctgctcctgaagaagatggtgaa
atgaacaatcttcagattgccatagctcgcatcaccagggctttagattggctcaaagcc
ttcattgccagaaagatgctgcagattttggggaagaaacctcctgatgtcaaagaagaa
gaaggggagaaagacacagaactgtactcaataaatcacctgcagaaagaaacaatgaca
gatgcccagacaaactgtttaacatctactgtacctattgcccactgtgagtctgatgtt
gaggaggaagatgaagaagaggaggaatcttctgatgaagatgacagaaaggtgggtctt
gatgatgacttgtcagtgtgcagtacggcggactatcagcctccagaacctgagcctgaa
cctgaggaagaggaggaaccggaaccggaggagccacagccctgtttcacagaaggttgc
attagacgatgtccgtggttgaacgtggacactacagaaggatggggaaaaaggtggtgg
aacctccggagaacgtgcttcaccattgttgagcatgactacttcgagaccttcatcatc
ttcatgatcctcctaagcagtggagctctggcttttgaagacatcaacattgagcgccgt
cgagtcattaagatcgttctggagttcgctgataaagtctttacatacatcttcatcttg
gagatgttactgaagtgggtggcatatggtttcaagacctactttaccaatgcatggtgc
tggctagacttccttattgttgatgtgtcgatcgtgagcttaaccgccaatttattgggt
tattctgagctgggagcgatcaaatctctccgaacgctcagagctcttcgtccgcttcga
gccctgtcaagatttgagggaatgagggttgtggtgaatgcactcgttggtgccatccca
tctatttttaatgtgctgctggtgtgcctgatattttggctgatcttcagcatcatggga
gtcaatctgtttgctggaaagttttatcactgcatcaacaccaccagcgaagaacgcttt
cctatggatgttgtgaacaacaagagcgattgcatgaatctgatgtacaccaatgaggcg
cgctgggtcaacattaaagtcaactatgacaacgtgggaatgggttacctctctctactg
caaattgccacatttaaaggttggatggacatcatgtatgcagcagtggattctagagag
gtggaggagcagccatcctatgagatcaacctctacatgtacctctattttgttatcttc
atcatttttggctcatttttcaccctcaacctcttcattggtgtcattattgataacttc
aatcaacagaaggccaagtttggaggtaaggacatcttcatgacagaggaacagaagaaa
tactacaatgccatgaagaagctggggaacaagaaacctgctaaacccatccctcgtcca
acaaataagatccagggcctggtgtttgacttaatatcacaacagttctttgatatcttc
atcatggtcctcatctgcctcaatatggtgaccatgatggtggagacggatgaccagagt
caagagaaagaggacatcttgtacctgatcaacctgatcttcgtggtggtctttacagga
gaatgtacgctcaagctgttggcgctcagacagtattttttcaccaacggctggaacgtc
ttcgattttgttgttgtgattctgtctatagcaggtctaatgttatcggacatcattgag
aagtactttgtgtctcccactctgtttcgcgtcatccgtctggctcgaatcggccgcgtg
cttcgtctcattagaggggcgaagggcatcaggactcttttgtttgccttgatgatgtca
ctgcctgctctttttaacatcggactgcttctgttcctcattatgttcatcttctccatc
tttggaatgtctaactttgcctacgtgaaaaagcaggcgggcatcgatgacctctttaac
tttgaaacgttcggcagcagcatcatctgcctgtttgagatcacgacctcggcgggctgg
gacggccttctgctgcccattatgaacagcggacctccggactgcgaccccaacgcagag
aaccccgggactgaggtcaagggtaactgcggcagtcccgctattggcattgtgttcttt
agcagttacatcatcatgtcgttcctggtggtggtgaacatgtacattgccatcattctg
gagaactttaatgtcgcccaggaggagagcagtgacctgctgtgcgaggacgactttgag
atgtttaacgagacgtgggaaaggtacgacttggaagcgacgcagttcatcgattacgac
cacttgtttgactttgccgacgccttgcttgaaccgctacgggtggcaaaacccaaccgc
ctgaagctgatcgccatggatttgcccgtggtgacgggcgacaaaatccactgtctggat
attctttcggcagtgacccgagaggttctgggcgataccatcgagatggtcgccatgcag
agcagcatcgagacaaagttcaaaaccaacaaccccacctccgcctctttcgcgcccatc
gtcaccacggtcagaaggaaagaggaggagcgtgccgctgtgataattcagcagacatac
cgcagacatctgctcagacgtgccgtccgtcacgcctgcttcatgcaccggtcaaagagc
gaaatcaggagtcaggaagatgaagaagcgcccgaaaccgagggcttgatcgcccggaaa
atgggctccctgtacggcagcaaccctgaactagccatggctctcgaactgcgcgttaga
ccgatgccagctgatgccgagcggctgcccagaacgacctcggtcgtacaacacgggtct
acagcgacttaccctcgacctcagggacaactcgtagtgccggtggagctcacgagtgag
gccgtcctccgctctgtgcccacatctgtacgtgcttcagaaaagcttaacattaaagag
tcagttgtgtaa
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