Paramisgurnus dabryanus (large-scale loach): 135727209
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Entry
135727209 CDS
T10799
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135727209 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
135727209 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
135727209 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
Plasmod_Pvs28
FXa_inhibition
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
135727209
NCBI-ProteinID:
XP_065101077
LinkDB
All DBs
Position
17:12854749..12976777
Genome browser
AA seq
1627 aa
AA seq
DB search
MAVFVWDIILALLISPALLSADQSGIRRLYVLQPGPSGNDRVHVSSITSLSGTSGQPHSY
NVELKARFGGQVRTRRMGHQPNPSIPIHQDPQPVRHTPSHQMKVSGVNVCGGQCCVGWSK
SPGSQRCIKPNCSPSCKNGGMCLRPHMCVCKMGSKGNSCEQTTLPPSSHPTGPLNGHTKG
GLPNGGHTNGYGNGHNVIPQRPIPQQTFPQSQGQVPLPLPGTSLGHMTLSMKQSANGPIP
YQPQVQNPISMHQSKGQKFMIQQKNYHTQTQMHGVGPTLNRPIPLSVGHNPLYVGNQTGR
IKVVFTPTICKMTCINGRCQNSCEPGNTTTIISENGHATDTLTAPNFRVVVCHLPCMNGG
KCSARDKCQCPPNFTGKFCQMLNPNGHQGQQTVVNGQKTHVHSTHTLPLTYGTGQNQGLV
NVHVKHPPEASVQIHQVSPVDSNGQVKNSQASHSFTYHITESSSSQSIQHGHNHGGVIYP
NQQTYLQYQPVTSKSQLGRCFQETTGMQCGKALPGLSKQDVCCGTVGTSWGFHKCQKCPK
KTSIPLQRPTTMIECPPGYKRLNATRCVDMDECQIPGVCPNGQCINNMGSYKCYCNTGFM
PDPTLSTCIPETPAIHEEKGACFRLVSSGKQCLHPVSTQLSKQLCCCSVGKAWGPRCEHC
PLPGTAAFKEICPGGMGYHVTTPHIYKPKFPAGHDGKNHPTIKHQAPVDPPMPFPTRQQP
VEALSITERQIPEVREKVSPPAPVAILPSHASQDISPTQLAEVDECHVNPYICGPGHCYN
THDSYECICETGYISDSTTCVDVDECAVTPGLCDNGHCQNTPGSFQCACDPGFMSNEEGT
RCSDIDECQDGRMCPSGLCSNTPGSFFCSPCPDGFEGKNGQCVDINECLDENVCAHGYCN
NLEGHFVCTCDKGFALSLDGKACTDIDECQDDSICIQGHCQNTEGSFICKCEPGFTLSST
EDQCDDVNECLELQQSCDGVGSCVNIFGSYQCNCQEGYRQVNGTSCQDVDECEEDTQLCF
PNGECLNTEGSFLCVCDAGFVSTRDPAGCEDVDECIDETRCVNGTCSNTDGSYLCQCKGG
YRLDPTRQACQDIDECAELGTSICGAWDCQNTPGSYRCEANCPPGHSKGDYGTCNDVDEC
SLNENTCGSHGVCQNTIGSFSCQCDPGFKSSQDGQGCVDVNECELLSDVCGEAFCENQEG
SYLCLCRDETQEFHSMSGKCFSTPPAPSVEKKECYYNLNDENLCENVLASSMTKEECCCT
LGAGWGDNCEVHPCPIPGTDQFSQMCPAGKGNVPTGESVIPGASLAERYKDADECVLFGE
EICKDGFCLNTPGGYECYCKAGLYYDENKLQCIDTDECEDESNCIDGQCLNSYGSYQCFC
NPPLVLAHDGNHCTSPAMAGQTEADVYEGICWETVTEQLTCTKPIANIQTTFSECCCLYG
DAWGMDCALCPQKDTEAYATMCNIRHHSGHLRPYGRDALVAGPIHEYEVRPEYEVRPEYD
PRPLNPDGTLPHFEDYDPARSPYDAFEGLRAEECGVLNGCENGRCVRVQEGYTCDCFDGY
TLDMSRMACVDINECSELNSKMSLCKNGKCINTQGSYKCVCLPGFVHSAQLNYCVAQTQK
GTSSSRE
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgttcgtatgggatatcattctggcgttattgatttctccggctttgctttcg
gcggatcagagcggcattaggagactttacgtgcttcaaccgggaccgagcggtaacgac
cgggttcacgtgagctccatcacatctctttcagggacgtcgggccagccgcactcatac
aatgtggaactcaaagccagattcggcggccaggtccggaccaggaggatgggtcaccag
ccgaacccgagcattccgatacaccaggaccctcagcctgtccgccacacacccagccat
caaatgaaagtgtcaggagtgaacgtctgtggggggcagtgctgtgttggttggagcaaa
agtccgggatctcagcgctgtatcaaacctaattgttcaccctcatgtaaaaacggagga
atgtgcttgcggccccacatgtgtgtgtgtaagatgggctccaaaggcaattcctgtgaa
cagaccactctccccccatcctctcatccgaccggaccactaaatggacacaccaaaggt
ggacttccaaacggtggccatacaaatggatacggcaatggtcataatgttattccccag
cggcctattcctcagcagacctttccacaaagccaaggccaggtcccattaccattgccc
ggcacaagcttgggacatatgaccctgtccatgaagcagtcagctaatggacccatccct
taccaaccacaagtgcaaaatcccatttcaatgcaccaaagcaaaggccagaaattcatg
attcaacagaagaactaccacactcagacacagatgcatggagtcggacccaccctcaac
cggcctatcccactttcggtaggacacaacccactttatgtgggaaatcaaaccggccgg
atcaaagtggtcttcacaccaactatctgcaagatgacctgcattaacgggcgctgtcag
aacagctgcgagccgggcaacaccaccaccatcatcagtgagaacgggcacgccacggac
acgctcaccgctcccaacttcagagtcgttgtttgccatttaccctgcatgaatggagga
aaatgcagtgctcgggacaagtgccagtgcccacccaactttaccgggaaattctgccaa
atgctaaatcccaacggtcaccaggggcaacagacagtggtaaatgggcagaagacacat
gtccactcaacacacactcttcccctaacctatggcactggacaaaaccaaggtttggtg
aatgtccatgtgaaacatcccccagaagcttcggttcagattcaccaggtgtctcctgtg
gacagtaatgggcaagtgaagaactcacaggccagccactccttcacttaccacatcacc
gagtccagcagtagtcagagcatccagcacgggcacaatcatggcggagtcatttacccc
aaccaacaaacatacctccagtaccagccggtgacatccaaaagccagctgggacgatgc
ttccaggagaccactggaatgcagtgtgggaaagctctgcctggcctgtctaagcaggat
gtttgctgtgggacggtgggcacatcatggggattccacaaatgccagaaatgtcccaaa
aaaacatcaattcctcttcagaggccaaccaccatgattgaatgtcctccaggctacaag
aggttgaatgccacccgctgcgtcgatatggatgaatgtcagattccaggtgtttgtccc
aatggacaatgcatcaacaacatgggcagctacaagtgttactgcaacaccggcttcatg
cctgaccccaccctctccacctgcatccccgaaacacctgccattcacgaggagaagggt
gcttgcttccgcttggtcagttcgggaaagcagtgcttgcacccggtgtccactcagctg
agtaaacagttgtgctgttgtagtgtgggcaaagcttgggggcctcgctgtgaacactgc
cccctacctgggacagctgcatttaaagagatatgccctggaggaatgggttaccatgta
accacaccacatatttacaagcccaaattccctgctggacatgacgggaaaaaccacccc
actatcaaacaccaagcacctgtggacccccctatgcctttccccacccggcagcagcct
gtagaggctctcagcatcacagagaggcaaataccagaggtgagagagaaggtgtcacca
cctgctccagtcgcaattctgccctctcatgcaagtcaggatatttcgccaacacaactg
gcagaggttgacgagtgtcacgtgaatccctatatttgtggtccaggacactgttataac
acgcatgacagctacgaatgcatctgtgaaactgggtatatatcagacagcaccacgtgt
gtagatgttgatgagtgtgcagtgactccaggtttgtgtgataatggtcactgtcagaac
actccaggcagtttccagtgtgcatgtgatcctggcttcatgtctaatgaggagggcacc
agatgctcggatattgatgaatgtcaggatggacgaatgtgcccatctggtctctgttct
aacactccgggatcattcttttgctctccgtgtccggatggattcgaaggaaaaaatggc
cagtgtgttgatataaatgaatgcctagatgaaaatgtgtgtgctcatggctactgcaac
aatctagagggccatttcgtctgcacgtgtgataaaggtttcgctctcagtttggacggc
aaagcctgcacagacattgatgaatgccaggatgatagcatttgtatccaaggtcactgt
cagaacacagaggggtcgttcatctgtaaatgtgagccaggctttacactttcctccaca
gaagaccagtgtgacgatgtgaatgagtgtttggagttacaacagagttgtgacggcgtg
ggcagctgtgttaatatatttggctcatatcagtgcaactgtcaagagggatatcgacaa
gtaaacggaaccagctgccaggatgttgatgagtgcgaagaagacacacagctgtgcttc
ccgaatggagagtgtttgaacaccgagggttcattcctgtgtgtgtgtgatgctggcttt
gtatccacacgtgatccagcgggctgtgaagatgtagatgaatgcatagatgagaccagg
tgtgtaaatggtacctgttcaaacacggatggatcgtatctatgccaatgtaaaggaggc
taccgcttggacccaaccagacaggcgtgccaggatattgatgagtgtgctgaactgggc
acgtctatttgtggggcatgggattgccaaaacacaccgggctcttaccgatgtgaggcg
aattgtccccccggccattccaaaggcgactacggcacctgcaatgatgtggatgagtgt
tctctgaatgagaatacctgtggaagtcatggtgtatgtcagaatacaattggctccttc
agctgccagtgtgatccaggatttaagagctctcaggatgggcagggctgtgtggatgtg
aacgagtgtgaactgctcagtgatgtgtgcggtgaggcattctgtgagaaccaagaagga
tcctacctgtgtttgtgtcgggatgagactcaagaattccactcaatgtctggcaaatgc
ttctctacacccccagcaccgtcggtggagaagaaggagtgctactacaacctgaacgat
gagaatctgtgtgaaaatgtgctggccagcagtatgactaaagaggaatgctgctgtaca
ctgggagcaggatggggggacaactgtgaggtccatccctgccccataccgggaacagat
cagttctctcagatgtgtcctgcgggcaagggtaacgttcctaccggagagtctgtgatt
cctggagctagtttagcagaacgctataaagatgcagatgaatgcgtgctctttggagag
gagatttgcaaagatggcttttgtctcaacacccctggtgggtacgaatgttactgcaag
gccgggctttactacgatgagaacaaactgcaatgtattgacactgatgaatgtgaggat
gagtctaactgtatagatggtcaatgtttaaactcatatggttcatatcagtgtttctgc
aatcctccgctggttctcgcacacgacggcaatcactgcacgtcaccagcaatggcagga
caaacagaagcagatgtgtatgaaggtatttgctgggagacggtgacagaacagctcacc
tgtaccaagcccatagccaacatacaaaccacattctcagagtgctgctgtttatacggc
gatgcctgggggatggactgcgctctctgcccccaaaaagatacagaggcctatgccact
atgtgtaatatacgtcaccatagtggtcaccttcgaccgtacggtcgagatgctctggtc
gctggcccaattcatgagtacgaggtgaggccggagtacgaggtcaggccggagtacgac
cctcgacctctcaaccctgacggcaccctgccccactttgaagattacgaccctgccaga
agtccttatgatgcatttgaaggattgcgagcggaggaatgcggcgtgcttaatggatgt
gagaatggtcgatgcgtgcgagtacaggagggatacacctgcgactgctttgatggatac
acactcgatatgtcccgcatggcctgcgtggatataaatgaatgctcagagctgaattca
aagatgtctctttgcaagaacggaaagtgcatcaacacgcaaggctcatataagtgcgtc
tgtctgccaggattcgtccactccgcccagctcaactactgcgtagcccaaacacagaaa
ggaaccagctcaagcagggagtga
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