Paramisgurnus dabryanus (large-scale loach): 135727642
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Entry
135727642 CDS
T10799
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04270
Vascular smooth muscle contraction
pdab04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135727642 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135727642 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135727642 (arhgef1)
Membrane trafficking [BR:
pdab04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135727642 (arhgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
DUF4719
Motif
Other DBs
NCBI-GeneID:
135727642
NCBI-ProteinID:
XP_065101640
LinkDB
All DBs
Position
13:17367398..17419016
Genome browser
AA seq
1044 aa
AA seq
DB search
MDYEDAHNGRGPCGAQSSNKAMSIIGAEDEDFENDEQPMVDDHCSHFTSIELLKNRPTHL
LVFLHHVMLQFDCAPVLCYLYADLFKNFNAKDTKKHFGEFCSTFLDKGAILRVTVPNHIA
ADFDRTRSEMISEDLQKHYVYEVQLLQAPEVLRQLEDFRQKRMMGMTPNERELTDVESHR
PTDRIPMEMKEKAVAEGLLERMVEANPSIVADKDKSNSIFGAVAFYMKHLGVKTRALDNK
KTRSGWRPSVPSVLKPWGGGKAKPPIHDKPRLDIEVKPKQNPAPRMPENERCSNAGRKPS
TVLPGTIHVSESNESPPIIVSVTPSPDSQNEIGANSSRFEPKPVSDGGDVSPVSPGAGLT
INEPPSFVDSLEEDNKDSVKNVRRSESLCVERRHSRRGGSTRAKQSRSRSDVDLQSTATS
HPPSPSSQLSVDSGLPSEVSLSDSTFGPTQQEELEPRLQELDQDPPNWRELADSDILNKL
SKKEIKRQEIINELFGTEHAHVRMLSVLQTVFYRPLEREEIMQIAEVEAIFPNLDEIFDM
HYAFFENLKTLREEDGYIVKNLSKPLLNRFSGSEGEWFQKLTARFCSHQSWALDQIKSRQ
KKDVRFNAFILEAESKPQCRRLQLKDIIPIEMQRLTKYPLLLENIAKNTEDDVEKSNITQ
AAECCRRILNHVNEEVKLMENMLILKEYQRRLDTSGLKPSNDLYTEYKTIDLSTRTMLFE
GPLTWRLTKEKAIDVHCVLLSDLMVLLQKQDDKMVLKCQSKSNIAVQEGKQMLSPIIKLQ
SVFLRDVATDPKALYVIFTWDSGAQIYELVAQSIGDRKNWTEVIKSTVDELKKRGGNKLD
RNRAGSMPSSAIGYGPLFPPPQSPTENGAELKSRSARYKSPFTDEKPSNSEPSLIDFLAT
NGFDLLSHSQTSQEKIASGALDEVMYLKRLLVRSINLSDDSQTVGENGGAEPESQEADGC
QSTVGESSMDIKAEGEGGGGDGSCKGEEESGISAPLVLSQERMEDVQRRLQVLEEQIKKL
QTIEEEHHKLQEVLAKYSLQGGHY
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggattatgaagacgcccataacgggcgtgggccgtgcggtgctcagagttctaataaa
gccatgagtataattggagcagaggatgaagactttgagaatgatgagcaacctatggtg
gatgatcactgcagtcactttacaagtattgaactgttgaagaacagacccacccacttg
ctggtcttcctccaccatgtcatgttgcagttcgactgtgctccagtactgtgctacctt
tatgctgacctcttcaagaacttcaacgccaaagacaccaagaaacactttggagaattc
tgcagcacttttctggataaaggagcgattctcagagtaaccgtgccaaaccacatagcc
gctgactttgatcgcacacggtcagaaatgatcagtgaagatctacagaagcattatgtt
tatgaagttcagcttctgcaggctccagaggtactgcgacagctggaagacttcaggcaa
aagaggatgatgggaatgactcctaatgagcgtgagttaactgatgtggagtcccatcgc
cccactgaccgtatccctatggagatgaaggaaaaggcggtagctgaaggcctgttggaa
aggatggttgaggcaaacccctcaattgttgcagacaaggacaaaagtaactccatcttt
ggagcagtggccttctatatgaagcaccttggagtcaagactagagcacttgacaacaag
aaaacaagatctggatggcggccttctgtaccctctgtgttgaagccatggggaggtgga
aaagccaaaccccctatacatgataagcctagattggacattgaagttaagcccaaacag
aacccagctccacgtatgccagaaaatgaaagatgcagcaatgccggccgaaagcccagt
acagttttgcctggcaccattcacgtctcagagagcaacgaatcgccccccatcattgtt
agtgtgactcccagccctgactcccaaaatgagatcggtgccaacagcagtcgctttgaa
cccaaaccagtgtcagatgggggagacgtgtctcctgtcagccctggtgcaggtctcacc
atcaatgaacctccgtcttttgtcgacagtcttgaggaggacaataaggacagtgtcaag
aacgtacgccgcagtgagagcctttgcgtggagcgccgtcactctcgccgtggtggctcc
acccgagccaagcagtctcgctcccgtagcgacgtggacctgcagtcgactgccacatcc
caccccccctcaccctcctcacagctctctgtggacagtggattgccatctgaagtgtcc
ctgtctgactccacgtttggccccactcagcaggaagagttagagccacgccttcaggag
ctggaccaggatccacccaactggagggaacttgctgacagtgacatcttgaacaaactg
agcaagaaggagatcaaaagacaggaaatcattaatgagttgtttgggacagagcacgct
catgttcgtatgttgagcgtattgcagaccgtgttttatcgtccactggagagggaagag
atcatgcagatagcagaagtggaagccatcttccctaaccttgatgagatcttcgatatg
cactatgccttctttgagaacctgaaaacattgcgtgaggaagacggttacattgtcaaa
aaccttagcaagccacttctgaatcggttcagtggctcagaaggagagtggtttcaaaag
ctcaccgcacgtttttgtagtcaccaatcatgggctctggatcagataaagagcagacag
aagaaagatgtccgttttaatgcgttcatactggaagcagagagtaaaccacagtgtagg
agactacagctgaaggatatcatccccattgagatgcaaagactaactaagtatcctctt
ctgctggagaacattgccaagaatacagaggatgacgtagaaaaatcaaacataacccaa
gccgcagagtgttgtcgcagaatcctcaaccacgtcaatgaagaagttaaactcatggag
aacatgctgattttgaaggagtaccagcgcagactggacacctcaggtctgaagccaagc
aatgatctctacactgagtacaagaccattgatctgtccactaggacgatgctgttcgaa
ggacctttgacatggaggctgaccaaggagaaagcaatcgatgttcactgtgtactgctg
tcggacctgatggtgttgctacagaaacaggatgataagatggttttaaagtgtcagagc
aaaagcaacatcgccgttcaggagggcaaacagatgttgagtccgatcatcaagctgcag
tcggtttttctcagagatgtggccactgacccaaaggctctctacgtcattttcacctgg
gacagcggagcacagatctacgagcttgtggctcaatccattggggataggaaaaattgg
acagaggtgattaagtctacagttgatgagctgaagaagagaggagggaataagctggac
agaaacagagctggcagtatgcccagcagcgccattggatacgggccattattccctccc
cctcaaagccccactgagaacggtgcagaattgaaaagtcgcagcgcccgatacaaatcc
ccctttactgatgagaagcctagcaattctgaaccttcactcatagacttcctagctacc
aatggcttcgacctgctcagccacagccagacctcccaagaaaaaatagctagtggggct
ttggacgaagtcatgtatttgaagagactattggtcaggagcatcaacctatcagatgac
tcccagactgttggagagaatggaggggcagagcctgaaagccaggaggcagacggctgt
caatcaacagtaggggaatccagtatggatatcaaagctgaaggagaagggggtggagga
gatggaagctgtaaaggagaagaagaaagcgggatcagcgctcctctggtgctctctcag
gagcgcatggaggacgtgcagaggagactgcaggttctcgaagaacagataaagaaactt
cagacaattgaggaggagcatcataaattgcaagaagtccttgccaagtattcacttcag
gggggccattactaa
DBGET
integrated database retrieval system
