Paramisgurnus dabryanus (large-scale loach): 135729953
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Entry
135729953 CDS
T10799
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab00310
Lysine degradation
pdab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
135729953 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135729953 (prdm6)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135729953 (prdm6)
Enzymes [BR:
pdab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
135729953 (prdm6)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
135729953 (prdm6)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
135729953 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
135729953
NCBI-ProteinID:
XP_065103927
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All DBs
Position
11:1515524..1542606
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AA seq
543 aa
AA seq
DB search
MHENLSHISCIFLQSDMLKPGEPSGSAFLKVDPTYIQHWQQLFPQKTAGGPLENLRQRPN
LISSTSSSSLPASSSTPSSVAGLSQLALFGQTDTSSGSAKNRELCSSSNCKNDRVSRVKL
TSEELDFYLYGQQRMEIIHSGDLHNRCDMCADNRNGECPMHGPLHSLRRLVGTSSASVAV
PPPEVPEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWVGPFQGASLSLDKVQSGSV
RNTRHLWEIYDQEGTLQYFIDGNEPSKSSWMRYIRCARHCGEQNMMVVQYRSCIFYRACT
DIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMSRQETLQPFNKSPKSSS
VVLPRSMVFPQSPSSRSFSLLDKNIHSESALNQMSSKNQRVLASPTSTSQLSSEFSDWHL
WKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCG
YCGRAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQATQLSRHQRMPNECKAISESSESI
EVD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagaatctatcacacatcagctgcattttcttacagtcggatatgctgaagccg
ggtgagcccagcggttctgctttcctcaaagtggacccaacttacatccagcactggcag
cagctgttcccgcagaaaacagccggcgggccgctggagaacctccgccagagacccaac
ctcatctcttcaacctcatcgtcctcgttaccggcatcctcgagcacgccgtcctctgta
gcggggttgagtcagctcgcgctgttcggacagaccgacaccagcagcggttcggctaag
aacagagaactttgctcgtcgtcaaactgtaagaatgatcgggtgtcgcgcgtgaagctg
acttcagaagagctggacttctacctgtacggccaacagaggatggagatcatccacagc
ggagaccttcataaccgctgtgacatgtgtgcagacaaccgtaacggcgagtgccccatg
cacggacccctgcactcgttgagaaggttggtggggaccagcagcgcctccgtggccgtt
cctcccccagaggtcccggagtggttgagggatttgcctcgcgaggtgtgtttgtgcacc
agcaccgtcccgggtctgggctacggcatctgtgcggctcaacgcatcccacagggcaca
tgggtcgggcccttccagggtgcatctctttctctggataaggtgcagtcggggtccgtg
cgaaacacaagacacttatgggagatttatgatcaggaaggaacgctgcaatacttcatc
gatggaaatgagcccagtaaatccagctggatgaggtacatacgctgtgccagacactgt
ggggaacagaacatgatggtggtgcagtacaggtcatgtattttctatcgggcctgcaca
gatattcctcgtggaacggagcttctggtttggtacaatgacagttacacatctttcttt
ggtatcccgctgcagtgcatcgctcaggatgaaaacttgaatgtgccgtctactgtaatg
gaggccatgagtcgtcaggaaacacttcaacctttcaataagagtcccaaatcctcttcg
gtggttctgccgcgctcaatggtgtttccacagtcgccctcctcacggagcttctcgctc
ctggacaagaacatccacagcgagtccgctttaaaccagatgagctccaaaaaccagcga
gtgctggcgagtcccacgtccaccagtcagctgagctcggagtttagtgattggcatctg
tggaagtgcggtcaatgcttcaagaccttcactcaacgcatactgctgcagatgcatgtg
tgcacacaaaaccctgacagaccgtatcagtgtggacactgttcccaatccttttctcaa
ccctcggagctgaggaatcacgtcgtgacacactccagcgatcggcccttcaagtgcggc
tactgcggtcgagcgttcgccggagccacgactctaaacaatcacatccgcacacacacg
ggagagaagcctttcaagtgcgagaggtgcgatcgcagtttcacgcaggccacgcagctc
agcagacaccagcggatgcccaacgagtgcaaagccatcagcgagagcagcgaatcaatc
gaggtggattaa
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